Cluster: CGMR053790_CGC18
🧬 Cluster Details
- Gene Count: 8
- CAZyme Count: 4
- Substrate:
- Genome ID: CGMR053790
- CGC Family ID: CGCFAM_00038
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | k141_93059 | k141_93059_37 | 33781 | 34587 | + | GT2 |
| NULL(UNKNOWN) | k141_93059 | k141_93059_38 | 34587 | 35840 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | k141_93059 | k141_93059_39 | 35792 | 36892 | - | GT4 |
| CAZyme | k141_93059 | k141_93059_40 | 36955 | 38079 | + | GT4 |
| CAZyme | k141_93059 | k141_93059_41 | 38080 | 38790 | + | GT2 |
| pfam | k141_93059 | k141_93059_42 | 38799 | 41306 | + | DUF6311 |
| pfam | k141_93059 | k141_93059_43 | 41287 | 42564 | + | Wzy_C |
| TC | k141_93059 | k141_93059_44 | 42524 | 43957 | - | 9.B.18.1.1 |
Gene ID: k141_93059_37
Type: CAZyme
Location: 33781 - 34587 (+)
Type: CAZyme
Location: 33781 - 34587 (+)
Gene ID: k141_93059_38
Type:
Location: 34587 - 35840 (+)
Type:
Location: 34587 - 35840 (+)
Gene ID: k141_93059_39
Type: CAZyme
Location: 35792 - 36892 (-)
Type: CAZyme
Location: 35792 - 36892 (-)
Gene ID: k141_93059_40
Type: CAZyme
Location: 36955 - 38079 (+)
Type: CAZyme
Location: 36955 - 38079 (+)
Gene ID: k141_93059_41
Type: CAZyme
Location: 38080 - 38790 (+)
Type: CAZyme
Location: 38080 - 38790 (+)
Gene ID: k141_93059_42
Type: pfam
Location: 38799 - 41306 (+)
Type: pfam
Location: 38799 - 41306 (+)
Gene ID: k141_93059_43
Type: pfam
Location: 41287 - 42564 (+)
Type: pfam
Location: 41287 - 42564 (+)
Gene ID: k141_93059_44
Type: TC
Location: 42524 - 43957 (-)
Type: TC
Location: 42524 - 43957 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Flavobacteriales
Family
Weeksellaceae
Genus
Empedobacter
Species
Empedobacter falsenii
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.