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Cluster: CGMR053678_CGC44

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme k141_35194 k141_35194_10 10200 11318 - CBM35inCE17 | CE17
TF k141_35194 k141_35194_11 11349 12368 - LacI
CAZyme k141_35194 k141_35194_12 12614 16684 - CBM23 | CBM27 | GH26
TC k141_35194 k141_35194_13 16812 18839 - 1.B.52.2.2
CAZyme k141_35194 k141_35194_14 18913 19935 - GH130_2
TC k141_35194 k141_35194_15 19992 20849 - 3.A.1.1.18
TC k141_35194 k141_35194_16 20849 21847 - 3.A.1.1.34
TC k141_35194 k141_35194_17 21939 23405 - 3.A.1.1.44
TF k141_35194 k141_35194_18 23763 24701 + HTH_AraC | HTH_AraC
TF k141_35194 k141_35194_19 24652 25671 - LacI
CAZyme k141_35194 k141_35194_20 26099 28420 + GH95
Gene ID: k141_35194_10
Type: CAZyme
Location: 10200 - 11318 (-)
Gene ID: k141_35194_11
Type: TF
Location: 11349 - 12368 (-)
Gene ID: k141_35194_12
Type: CAZyme
Location: 12614 - 16684 (-)
Gene ID: k141_35194_13
Type: TC
Location: 16812 - 18839 (-)
Gene ID: k141_35194_14
Type: CAZyme
Location: 18913 - 19935 (-)
Gene ID: k141_35194_15
Type: TC
Location: 19992 - 20849 (-)
Gene ID: k141_35194_16
Type: TC
Location: 20849 - 21847 (-)
Gene ID: k141_35194_17
Type: TC
Location: 21939 - 23405 (-)
Gene ID: k141_35194_18
Type: TF
Location: 23763 - 24701 (+)
Gene ID: k141_35194_19
Type: TF
Location: 24652 - 25671 (-)
Gene ID: k141_35194_20
Type: CAZyme
Location: 26099 - 28420 (+)

Taxonomic Lineage

Domain
Bacteria

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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