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Cluster: CGMR053678_CGC42

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_36406 k141_36406_5 6259 6825 + 2.A.107.1.2
pfam k141_36406 k141_36406_6 6938 7948 - AsnA
pfam k141_36406 k141_36406_7 8334 9338 - Asparaginase | Asparaginase_C
CAZyme k141_36406 k141_36406_8 9750 11477 + CBM34 | GH13_20
TC k141_36406 k141_36406_9 11562 12995 + 9.A.11.1.1
CAZyme k141_36406 k141_36406_10 13135 14418 + GH18
TF k141_36406 k141_36406_11 14839 15306 + MarR
pfam k141_36406 k141_36406_12 15425 16360 + DUF4349
TC k141_36406 k141_36406_13 16544 18097 + 2.A.35.2.1
TC k141_36406 k141_36406_14 18338 19132 - 3.A.1.34.1
TC k141_36406 k141_36406_15 19161 20117 - 3.A.1.34.1
TC k141_36406 k141_36406_16 20442 21422 - 3.A.1.34.1
Gene ID: k141_36406_5
Type: TC
Location: 6259 - 6825 (+)
Gene ID: k141_36406_6
Type: pfam
Location: 6938 - 7948 (-)
Gene ID: k141_36406_7
Type: pfam
Location: 8334 - 9338 (-)
Gene ID: k141_36406_8
Type: CAZyme
Location: 9750 - 11477 (+)
Gene ID: k141_36406_9
Type: TC
Location: 11562 - 12995 (+)
Gene ID: k141_36406_10
Type: CAZyme
Location: 13135 - 14418 (+)
Gene ID: k141_36406_11
Type: TF
Location: 14839 - 15306 (+)
Gene ID: k141_36406_12
Type: pfam
Location: 15425 - 16360 (+)
Gene ID: k141_36406_13
Type: TC
Location: 16544 - 18097 (+)
Gene ID: k141_36406_14
Type: TC
Location: 18338 - 19132 (-)
Gene ID: k141_36406_15
Type: TC
Location: 19161 - 20117 (-)
Gene ID: k141_36406_16
Type: TC
Location: 20442 - 21422 (-)

Taxonomic Lineage

Domain
Bacteria

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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