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Cluster: CGMR053470_CGC17

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_563596 k141_563596_8 4671 6056 - 8.A.3.3.4
TC k141_563596 k141_563596_9 6046 7467 - 8.A.3.1.2
pfam k141_563596 k141_563596_10 7470 8300 - Big_3
CAZyme k141_563596 k141_563596_11 8342 9475 - GT4
pfam k141_563596 k141_563596_12 9546 9998 - Hexapep | Hexapep_2
CAZyme k141_563596 k141_563596_13 9995 11122 - GT4
CAZyme k141_563596 k141_563596_14 11132 12214 - GT4
pfam k141_563596 k141_563596_15 12215 13243 - 3Beta_HSD | Epimerase | Polysacc_synt_2 | RmlD_sub_bind | NAD_binding_4 | GDP_Man_Dehyd
TC k141_563596 k141_563596_16 13297 14763 - 9.B.18.1.2
NULL(UNKNOWN) k141_563596 k141_563596_17 14965 15627 + NULL(UNKNOWN)
[View Structural Homologs]
TC k141_563596 k141_563596_18 15575 16441 + 1.E.12.1.3
Gene ID: k141_563596_8
Type: TC
Location: 4671 - 6056 (-)
Gene ID: k141_563596_9
Type: TC
Location: 6046 - 7467 (-)
Gene ID: k141_563596_10
Type: pfam
Location: 7470 - 8300 (-)
Gene ID: k141_563596_11
Type: CAZyme
Location: 8342 - 9475 (-)
Gene ID: k141_563596_12
Type: pfam
Location: 9546 - 9998 (-)
Gene ID: k141_563596_13
Type: CAZyme
Location: 9995 - 11122 (-)
Gene ID: k141_563596_14
Type: CAZyme
Location: 11132 - 12214 (-)
Gene ID: k141_563596_15
Type: pfam
Location: 12215 - 13243 (-)
Gene ID: k141_563596_16
Type: TC
Location: 13297 - 14763 (-)
Gene ID: k141_563596_17
Type:
Location: 14965 - 15627 (+)
Gene ID: k141_563596_18
Type: TC
Location: 15575 - 16441 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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