Cluster: CGMR053434_CGC26
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: CGMR053434
- CGC Family ID: CGCFAM_00013
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | k141_85142 | k141_85142_3 | 2122 | 3237 | - | GT28 |
| TC | k141_85142 | k141_85142_4 | 3396 | 4703 | - | 2.A.103.1.2 |
| pfam | k141_85142 | k141_85142_5 | 4739 | 6076 | - | Mur_ligase_C | Mur_ligase_M | MurD_N | MurD-like_N |
| TC | k141_85142 | k141_85142_6 | 6081 | 7328 | - | 9.B.146.1.6 |
| pfam | k141_85142 | k141_85142_7 | 7349 | 8791 | - | Mur_ligase | Mur_ligase_C | Mur_ligase_M |
| TC | k141_85142 | k141_85142_8 | 8898 | 11138 | - | 2.A.37.1.5 |
Gene ID: k141_85142_3
Type: CAZyme
Location: 2122 - 3237 (-)
Type: CAZyme
Location: 2122 - 3237 (-)
Gene ID: k141_85142_4
Type: TC
Location: 3396 - 4703 (-)
Type: TC
Location: 3396 - 4703 (-)
Gene ID: k141_85142_5
Type: pfam
Location: 4739 - 6076 (-)
Type: pfam
Location: 4739 - 6076 (-)
Gene ID: k141_85142_6
Type: TC
Location: 6081 - 7328 (-)
Type: TC
Location: 6081 - 7328 (-)
Gene ID: k141_85142_7
Type: pfam
Location: 7349 - 8791 (-)
Type: pfam
Location: 7349 - 8791 (-)
Gene ID: k141_85142_8
Type: TC
Location: 8898 - 11138 (-)
Type: TC
Location: 8898 - 11138 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes_A
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| k141_85142_6 | vegetarian > vegan | 1.37091 | 0.01047 |