Cluster: CGMR053434_CGC23
🧬 Cluster Details
- Gene Count: 8
- CAZyme Count: 3
- Substrate:
- Genome ID: CGMR053434
- CGC Family ID: CGCFAM_01423
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | k141_28549 | k141_28549_1 | 3 | 1955 | + | GH2 |
| pfam | k141_28549 | k141_28549_2 | 2048 | 3016 | + | ROK |
| STP | k141_28549 | k141_28549_3 | 3203 | 3796 | + | SIS |
| TC | k141_28549 | k141_28549_4 | 3930 | 5093 | + | 2.A.1.7.17 |
| CAZyme | k141_28549 | k141_28549_5 | 5131 | 7200 | + | GH36 |
| CAZyme | k141_28549 | k141_28549_6 | 7228 | 9315 | + | GH36 |
| NULL(UNKNOWN) | k141_28549 | k141_28549_7 | 9349 | 9450 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | k141_28549 | k141_28549_8 | 9638 | 11014 | + | 2.A.81.1.2 |
Gene ID: k141_28549_1
Type: CAZyme
Location: 3 - 1955 (+)
Type: CAZyme
Location: 3 - 1955 (+)
Gene ID: k141_28549_2
Type: pfam
Location: 2048 - 3016 (+)
Type: pfam
Location: 2048 - 3016 (+)
Gene ID: k141_28549_3
Type: STP
Location: 3203 - 3796 (+)
Type: STP
Location: 3203 - 3796 (+)
Gene ID: k141_28549_4
Type: TC
Location: 3930 - 5093 (+)
Type: TC
Location: 3930 - 5093 (+)
Gene ID: k141_28549_5
Type: CAZyme
Location: 5131 - 7200 (+)
Type: CAZyme
Location: 5131 - 7200 (+)
Gene ID: k141_28549_6
Type: CAZyme
Location: 7228 - 9315 (+)
Type: CAZyme
Location: 7228 - 9315 (+)
Gene ID: k141_28549_7
Type:
Location: 9349 - 9450 (+)
Type:
Location: 9349 - 9450 (+)
Gene ID: k141_28549_8
Type: TC
Location: 9638 - 11014 (+)
Type: TC
Location: 9638 - 11014 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes_A
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.