Cluster: CGMR053434_CGC19
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate:
- Genome ID: CGMR053434
- CGC Family ID: CGCFAM_05026
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | k141_64708 | k141_64708_10 | 10437 | 12731 | - | 1.B.14.10.1 |
| CAZyme | k141_64708 | k141_64708_11 | 12830 | 13504 | + | GH25 |
| TC | k141_64708 | k141_64708_12 | 13521 | 14921 | + | 3.D.10.1.1 |
Gene ID: k141_64708_10
Type: TC
Location: 10437 - 12731 (-)
Type: TC
Location: 10437 - 12731 (-)
Gene ID: k141_64708_11
Type: CAZyme
Location: 12830 - 13504 (+)
Type: CAZyme
Location: 12830 - 13504 (+)
Gene ID: k141_64708_12
Type: TC
Location: 13521 - 14921 (+)
Type: TC
Location: 13521 - 14921 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes_A
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| k141_64708_12 | vegetarian > vegan | 1.46272 | 0.01047 |