Cluster: CGMR053389_CGC4
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 2
- Substrate:
- Genome ID: CGMR053389
- CGC Family ID: CGCFAM_01559
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | k141_165327 | k141_165327_411 | 389636 | 390376 | + | GT26 |
| pfam | k141_165327 | k141_165327_412 | 390318 | 390824 | - | Acetyltransf_1 | FR47 | Acetyltransf_3 | Acetyltransf_7 | Acetyltransf_10 |
| TF | k141_165327 | k141_165327_413 | 390893 | 391594 | - | GntR |
| CAZyme | k141_165327 | k141_165327_414 | 391630 | 392772 | - | CE9 |
| pfam | k141_165327 | k141_165327_415 | 392858 | 393661 | - | NAD_binding_2 | F420_oxidored | P5CR_dimer |
| pfam | k141_165327 | k141_165327_416 | 394138 | 394914 | - | Metallophos |
| TC | k141_165327 | k141_165327_417 | 395023 | 396630 | - | 2.A.17.1.6 |
Gene ID: k141_165327_411
Type: CAZyme
Location: 389636 - 390376 (+)
Type: CAZyme
Location: 389636 - 390376 (+)
Gene ID: k141_165327_412
Type: pfam
Location: 390318 - 390824 (-)
Type: pfam
Location: 390318 - 390824 (-)
Gene ID: k141_165327_413
Type: TF
Location: 390893 - 391594 (-)
Type: TF
Location: 390893 - 391594 (-)
Gene ID: k141_165327_414
Type: CAZyme
Location: 391630 - 392772 (-)
Type: CAZyme
Location: 391630 - 392772 (-)
Gene ID: k141_165327_415
Type: pfam
Location: 392858 - 393661 (-)
Type: pfam
Location: 392858 - 393661 (-)
Gene ID: k141_165327_416
Type: pfam
Location: 394138 - 394914 (-)
Type: pfam
Location: 394138 - 394914 (-)
Gene ID: k141_165327_417
Type: TC
Location: 395023 - 396630 (-)
Type: TC
Location: 395023 - 396630 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota
Class
Bacilli
Order
Lactobacillales
Family
Lactobacillaceae
Genus
Levilactobacillus
Species
Levilactobacillus brevis
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.