Cluster: CGMR053370_CGC33
🧬 Cluster Details
- Gene Count: 11
- CAZyme Count: 4
- Substrate:
- Genome ID: CGMR053370
- CGC Family ID: CGCFAM_08705
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | k141_46519 | k141_46519_226 | 250015 | 252462 | - | 3.A.1.122.15 |
| TC | k141_46519 | k141_46519_227 | 252499 | 253194 | - | 3.A.1.122.15 |
| pfam | k141_46519 | k141_46519_228 | 253251 | 253862 | + | Lipase_GDSL | Lipase_GDSL_2 |
| STP | k141_46519 | k141_46519_229 | 253956 | 254900 | - | CheW | Response_reg |
| CAZyme | k141_46519 | k141_46519_230 | 255041 | 258061 | - | CBM73 | GH18 |
| pfam | k141_46519 | k141_46519_231 | 258561 | 260747 | + | Exo_endo_phos |
| NULL(UNKNOWN) | k141_46519 | k141_46519_232 | 261436 | 261555 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | k141_46519 | k141_46519_233 | 261730 | 263646 | - | CBM73 | GH19 |
| CAZyme | k141_46519 | k141_46519_234 | 263726 | 266707 | - | CBM5 | CBM5 |
| CAZyme | k141_46519 | k141_46519_235 | 266780 | 269380 | - | GH18 |
| TC | k141_46519 | k141_46519_236 | 269775 | 273248 | - | 2.A.21.9.2 |
Gene ID: k141_46519_226
Type: TC
Location: 250015 - 252462 (-)
Type: TC
Location: 250015 - 252462 (-)
Gene ID: k141_46519_227
Type: TC
Location: 252499 - 253194 (-)
Type: TC
Location: 252499 - 253194 (-)
Gene ID: k141_46519_228
Type: pfam
Location: 253251 - 253862 (+)
Type: pfam
Location: 253251 - 253862 (+)
Gene ID: k141_46519_229
Type: STP
Location: 253956 - 254900 (-)
Type: STP
Location: 253956 - 254900 (-)
Gene ID: k141_46519_230
Type: CAZyme
Location: 255041 - 258061 (-)
Type: CAZyme
Location: 255041 - 258061 (-)
Gene ID: k141_46519_231
Type: pfam
Location: 258561 - 260747 (+)
Type: pfam
Location: 258561 - 260747 (+)
Gene ID: k141_46519_232
Type:
Location: 261436 - 261555 (+)
Type:
Location: 261436 - 261555 (+)
Gene ID: k141_46519_233
Type: CAZyme
Location: 261730 - 263646 (-)
Type: CAZyme
Location: 261730 - 263646 (-)
Gene ID: k141_46519_234
Type: CAZyme
Location: 263726 - 266707 (-)
Type: CAZyme
Location: 263726 - 266707 (-)
Gene ID: k141_46519_235
Type: CAZyme
Location: 266780 - 269380 (-)
Type: CAZyme
Location: 266780 - 269380 (-)
Gene ID: k141_46519_236
Type: TC
Location: 269775 - 273248 (-)
Type: TC
Location: 269775 - 273248 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Aeromonadaceae
Genus
Aeromonas
Species
Aeromonas jandaei
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.