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Cluster: CGMR053370_CGC28

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_46519 k141_46519_31 34839 36524 + 3.A.1.5.14
TC k141_46519 k141_46519_32 36644 37627 + 3.A.1.5.16
TC k141_46519 k141_46519_33 37629 38549 + 3.A.1.5.14
TC k141_46519 k141_46519_34 38546 39565 + 3.A.1.5.15
TC k141_46519 k141_46519_35 39577 40569 + 3.A.1.5.35
CAZyme k141_46519 k141_46519_36 40684 42399 + GH9
pfam k141_46519 k141_46519_37 42392 43264 + BcrAD_BadFG
CAZyme k141_46519 k141_46519_38 43249 45114 + GH20
pfam k141_46519 k141_46519_39 45235 45615 + DNA_binding_1
NULL(UNKNOWN) k141_46519 k141_46519_40 45656 45820 - NULL(UNKNOWN)
[View Structural Homologs]
TC k141_46519 k141_46519_41 45918 48539 - 3.A.7.7.1
Gene ID: k141_46519_31
Type: TC
Location: 34839 - 36524 (+)
Gene ID: k141_46519_32
Type: TC
Location: 36644 - 37627 (+)
Gene ID: k141_46519_33
Type: TC
Location: 37629 - 38549 (+)
Gene ID: k141_46519_34
Type: TC
Location: 38546 - 39565 (+)
Gene ID: k141_46519_35
Type: TC
Location: 39577 - 40569 (+)
Gene ID: k141_46519_36
Type: CAZyme
Location: 40684 - 42399 (+)
Gene ID: k141_46519_37
Type: pfam
Location: 42392 - 43264 (+)
Gene ID: k141_46519_38
Type: CAZyme
Location: 43249 - 45114 (+)
Gene ID: k141_46519_39
Type: pfam
Location: 45235 - 45615 (+)
Gene ID: k141_46519_40
Type:
Location: 45656 - 45820 (-)
Gene ID: k141_46519_41
Type: TC
Location: 45918 - 48539 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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