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Cluster: CGMR053370_CGC1

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_113745 k141_113745_49 53157 55025 + 2.A.72.1.1
pfam k141_113745 k141_113745_50 55296 56060 + TonB_C
TC k141_113745 k141_113745_51 56063 56815 + 1.A.30.2.2
TC k141_113745 k141_113745_52 56815 57237 + 1.A.30.2.7
pfam k141_113745 k141_113745_53 57361 58740 + tRNA_anti-codon | Exonuc_VII_L | tRNA_anti_2
TF k141_113745 k141_113745_54 58869 59588 - GntR
TC k141_113745 k141_113745_55 59836 61794 + 4.A.2.1.3
CAZyme k141_113745 k141_113745_56 61881 64535 + GH38
Gene ID: k141_113745_49
Type: TC
Location: 53157 - 55025 (+)
Gene ID: k141_113745_50
Type: pfam
Location: 55296 - 56060 (+)
Gene ID: k141_113745_51
Type: TC
Location: 56063 - 56815 (+)
Gene ID: k141_113745_52
Type: TC
Location: 56815 - 57237 (+)
Gene ID: k141_113745_53
Type: pfam
Location: 57361 - 58740 (+)
Gene ID: k141_113745_54
Type: TF
Location: 58869 - 59588 (-)
Gene ID: k141_113745_55
Type: TC
Location: 59836 - 61794 (+)
Gene ID: k141_113745_56
Type: CAZyme
Location: 61881 - 64535 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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