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Cluster: CGMR052912_CGC8

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_233404 k141_233404_4 1954 2577 + 2.A.115.2.14
STP k141_233404 k141_233404_5 2586 3164 + NUDIX
pfam k141_233404 k141_233404_6 3202 3636 + YpsA
CAZyme k141_233404 k141_233404_7 3861 6683 + GH31
CAZyme k141_233404 k141_233404_8 6840 9656 + GH31
CAZyme k141_233404 k141_233404_9 9827 12625 + GH31
TF k141_233404 k141_233404_10 12730 13497 - 0035607 | 0036286
CAZyme k141_233404 k141_233404_11 13717 17217 + GH31
CAZyme k141_233404 k141_233404_12 17437 19809 + GH31_15
Gene ID: k141_233404_4
Type: TC
Location: 1954 - 2577 (+)
Gene ID: k141_233404_5
Type: STP
Location: 2586 - 3164 (+)
Gene ID: k141_233404_6
Type: pfam
Location: 3202 - 3636 (+)
Gene ID: k141_233404_7
Type: CAZyme
Location: 3861 - 6683 (+)
Gene ID: k141_233404_8
Type: CAZyme
Location: 6840 - 9656 (+)
Gene ID: k141_233404_9
Type: CAZyme
Location: 9827 - 12625 (+)
Gene ID: k141_233404_10
Type: TF
Location: 12730 - 13497 (-)
Gene ID: k141_233404_11
Type: CAZyme
Location: 13717 - 17217 (+)
Gene ID: k141_233404_12
Type: CAZyme
Location: 17437 - 19809 (+)

Taxonomic Lineage

Domain
Bacteria
→
Phylum
Bacillota_A
→
Class
Clostridia
→
Order
Oscillospirales
→
Family
CAG-272
→
Genus
UMGS902
→
Species
UMGS902 sp900761025

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
k141_233404_6 vegetarian > omnivore 2.13591 0.02242
k141_233404_6 vegetarian > vegan 3.56411 0.00119

🧭 Explore Read Mapping of CGC

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