Cluster: CGMR052682_CGC7
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: CGMR052682
- CGC Family ID: CGCFAM_08698
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | k141_2381 | k141_2381_380 | 399861 | 400799 | - | 9.B.50.1.4 |
| pfam | k141_2381 | k141_2381_381 | 401750 | 402685 | + | ATP_bind_3 |
| TC | k141_2381 | k141_2381_382 | 402730 | 404103 | - | 3.A.18.1.1 |
| TC | k141_2381 | k141_2381_383 | 404586 | 405569 | - | 1.A.35.4.1 |
| TF | k141_2381 | k141_2381_384 | 406020 | 406802 | + | HTH_DeoR |
| CAZyme | k141_2381 | k141_2381_385 | 406816 | 407883 | + | GH109 |
Gene ID: k141_2381_380
Type: TC
Location: 399861 - 400799 (-)
Type: TC
Location: 399861 - 400799 (-)
Gene ID: k141_2381_381
Type: pfam
Location: 401750 - 402685 (+)
Type: pfam
Location: 401750 - 402685 (+)
Gene ID: k141_2381_382
Type: TC
Location: 402730 - 404103 (-)
Type: TC
Location: 402730 - 404103 (-)
Gene ID: k141_2381_383
Type: TC
Location: 404586 - 405569 (-)
Type: TC
Location: 404586 - 405569 (-)
Gene ID: k141_2381_384
Type: TF
Location: 406020 - 406802 (+)
Type: TF
Location: 406020 - 406802 (+)
Gene ID: k141_2381_385
Type: CAZyme
Location: 406816 - 407883 (+)
Type: CAZyme
Location: 406816 - 407883 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Klebsiella
Species
Klebsiella oxytoca
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.