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Cluster: CGMR052682_CGC69

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_1359 k141_1359_328 357705 358532 - 3.A.1.17.1
TC k141_1359 k141_1359_329 358529 359296 - 3.A.1.17.1
TC k141_1359 k141_1359_330 359308 360270 - 3.A.1.17.1
TF k141_1359 k141_1359_331 360612 361241 + GerE
STP k141_1359 k141_1359_332 361241 362782 + HATPase_c | MASE1
TC k141_1359 k141_1359_333 362867 364162 + 2.A.1.4.4
TC k141_1359 k141_1359_334 364162 365193 + 3.A.1.20.2
TC k141_1359 k141_1359_335 365263 367341 + 3.A.1.20.2
TC k141_1359 k141_1359_336 367353 368399 + 3.A.1.20.2
pfam k141_1359 k141_1359_337 368489 369421 - S-methyl_trans
TC k141_1359 k141_1359_338 369408 370841 - 2.A.3.1.10
CAZyme k141_1359 k141_1359_339 371046 372428 + GH28
TC k141_1359 k141_1359_340 372797 374176 + 2.A.3.5.1
Gene ID: k141_1359_328
Type: TC
Location: 357705 - 358532 (-)
Gene ID: k141_1359_329
Type: TC
Location: 358529 - 359296 (-)
Gene ID: k141_1359_330
Type: TC
Location: 359308 - 360270 (-)
Gene ID: k141_1359_331
Type: TF
Location: 360612 - 361241 (+)
Gene ID: k141_1359_332
Type: STP
Location: 361241 - 362782 (+)
Gene ID: k141_1359_333
Type: TC
Location: 362867 - 364162 (+)
Gene ID: k141_1359_334
Type: TC
Location: 364162 - 365193 (+)
Gene ID: k141_1359_335
Type: TC
Location: 365263 - 367341 (+)
Gene ID: k141_1359_336
Type: TC
Location: 367353 - 368399 (+)
Gene ID: k141_1359_337
Type: pfam
Location: 368489 - 369421 (-)
Gene ID: k141_1359_338
Type: TC
Location: 369408 - 370841 (-)
Gene ID: k141_1359_339
Type: CAZyme
Location: 371046 - 372428 (+)
Gene ID: k141_1359_340
Type: TC
Location: 372797 - 374176 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
k141_1359_334 vegetarian > omnivore 2.10170 0.01294

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