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Cluster: CGMR052682_CGC66

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_1359 k141_1359_61 71211 72728 + 1.B.3.1.2
TC k141_1359 k141_1359_62 72864 74234 + 4.A.1.2.1
CAZyme k141_1359 k141_1359_63 74234 75634 + GH32
TF k141_1359 k141_1359_64 75665 76669 + LacI
pfam k141_1359 k141_1359_65 76671 77510 - PRD | PRD | CAT_RBD
CAZyme k141_1359 k141_1359_66 77507 78931 - GH1
TC k141_1359 k141_1359_67 78928 80808 - 4.A.1.2.11
TF k141_1359 k141_1359_68 81020 81949 - HTH_1
TC k141_1359 k141_1359_69 82157 83071 + 3.A.1.4.8
TC k141_1359 k141_1359_70 83082 84188 + 3.A.1.4.8
TC k141_1359 k141_1359_71 84185 84952 + 3.A.1.4.10
TC k141_1359 k141_1359_72 84945 85664 + 3.A.1.4.10
TC k141_1359 k141_1359_73 85692 86849 + 3.A.1.4.3
pfam k141_1359 k141_1359_74 86867 87349 + ATC_hydrolase
peptidase k141_1359 k141_1359_75 87346 88590 + M20.UNW
TC k141_1359 k141_1359_76 88636 89667 - 3.A.1.2.15
TC k141_1359 k141_1359_77 89678 91162 - 3.A.1.2.3
TC k141_1359 k141_1359_78 91187 92110 - 3.A.1.2.15
TF k141_1359 k141_1359_79 92560 93579 - LacI
pfam k141_1359 k141_1359_80 93683 94690 + GFO_IDH_MocA | GFO_IDH_MocA_C | F420_oxidored | GFO_IDH_MocA_C3
CAZyme k141_1359 k141_1359_81 94734 95765 - GH179
Gene ID: k141_1359_61
Type: TC
Location: 71211 - 72728 (+)
Gene ID: k141_1359_62
Type: TC
Location: 72864 - 74234 (+)
Gene ID: k141_1359_63
Type: CAZyme
Location: 74234 - 75634 (+)
Gene ID: k141_1359_64
Type: TF
Location: 75665 - 76669 (+)
Gene ID: k141_1359_65
Type: pfam
Location: 76671 - 77510 (-)
Gene ID: k141_1359_66
Type: CAZyme
Location: 77507 - 78931 (-)
Gene ID: k141_1359_67
Type: TC
Location: 78928 - 80808 (-)
Gene ID: k141_1359_68
Type: TF
Location: 81020 - 81949 (-)
Gene ID: k141_1359_69
Type: TC
Location: 82157 - 83071 (+)
Gene ID: k141_1359_70
Type: TC
Location: 83082 - 84188 (+)
Gene ID: k141_1359_71
Type: TC
Location: 84185 - 84952 (+)
Gene ID: k141_1359_72
Type: TC
Location: 84945 - 85664 (+)
Gene ID: k141_1359_73
Type: TC
Location: 85692 - 86849 (+)
Gene ID: k141_1359_74
Type: pfam
Location: 86867 - 87349 (+)
Gene ID: k141_1359_75
Type: peptidase
Location: 87346 - 88590 (+)
Gene ID: k141_1359_76
Type: TC
Location: 88636 - 89667 (-)
Gene ID: k141_1359_77
Type: TC
Location: 89678 - 91162 (-)
Gene ID: k141_1359_78
Type: TC
Location: 91187 - 92110 (-)
Gene ID: k141_1359_79
Type: TF
Location: 92560 - 93579 (-)
Gene ID: k141_1359_80
Type: pfam
Location: 93683 - 94690 (+)
Gene ID: k141_1359_81
Type: CAZyme
Location: 94734 - 95765 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
k141_1359_69 vegan > omnivore 1.52777 0.01882

🧭 Explore Read Mapping of CGC

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