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Cluster: CGMR052682_CGC63

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme k141_1759 k141_1759_5 3224 4207 + GT2
pfam k141_1759 k141_1759_6 4204 6189 + Formyl_trans_N | Epimerase | Formyl_trans_C | GDP_Man_Dehyd
pfam k141_1759 k141_1759_7 6186 7088 + Polysacc_deac_1
CAZyme k141_1759 k141_1759_8 7088 8743 + GT83
TC k141_1759 k141_1759_9 8740 9078 + 2.A.7.22.2
TC k141_1759 k141_1759_10 9078 9461 + 2.A.7.22.1
TC k141_1759 k141_1759_11 9458 10507 - 2.A.86.1.2
TC k141_1759 k141_1759_12 10640 11860 + 2.A.1.46.7
pfam k141_1759 k141_1759_13 11861 12418 - DcrB
TC k141_1759 k141_1759_14 12492 13157 - 2.A.88.8.6
pfam k141_1759 k141_1759_15 13449 13694 + TusA
TC k141_1759 k141_1759_16 13805 16009 - 3.A.3.6.2
Gene ID: k141_1759_5
Type: CAZyme
Location: 3224 - 4207 (+)
Gene ID: k141_1759_6
Type: pfam
Location: 4204 - 6189 (+)
Gene ID: k141_1759_7
Type: pfam
Location: 6186 - 7088 (+)
Gene ID: k141_1759_8
Type: CAZyme
Location: 7088 - 8743 (+)
Gene ID: k141_1759_9
Type: TC
Location: 8740 - 9078 (+)
Gene ID: k141_1759_10
Type: TC
Location: 9078 - 9461 (+)
Gene ID: k141_1759_11
Type: TC
Location: 9458 - 10507 (-)
Gene ID: k141_1759_12
Type: TC
Location: 10640 - 11860 (+)
Gene ID: k141_1759_13
Type: pfam
Location: 11861 - 12418 (-)
Gene ID: k141_1759_14
Type: TC
Location: 12492 - 13157 (-)
Gene ID: k141_1759_15
Type: pfam
Location: 13449 - 13694 (+)
Gene ID: k141_1759_16
Type: TC
Location: 13805 - 16009 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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