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Cluster: CGMR052682_CGC61

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_504 k141_504_30 30895 32262 + 4.A.7.1.4
pfam k141_504 k141_504_31 32249 33091 + F_bP_aldolase
NULL(UNKNOWN) k141_504 k141_504_32 33148 33417 + NULL(UNKNOWN)
[View Structural Homologs]
TC k141_504 k141_504_33 33427 33864 + 4.A.7.1.1
NULL(UNKNOWN) k141_504 k141_504_34 33861 34412 + NULL(UNKNOWN)
[View Structural Homologs]
pfam k141_504 k141_504_35 34544 35578 + DUF3829
TC k141_504 k141_504_36 35616 35939 - 2.A.78.2.3
TC k141_504 k141_504_37 35939 36628 - 2.A.78.2.3
TF k141_504 k141_504_38 36699 37247 + HTH_3
TF k141_504 k141_504_39 37323 38318 + LacI
CAZyme k141_504 k141_504_40 38433 40556 + GH36
TC k141_504 k141_504_41 40556 41863 + 2.A.1.5.4
pfam k141_504 k141_504_42 41903 42496 + Hexapep | Mac | Hexapep_2
TC k141_504 k141_504_43 42599 43978 + 1.B.15.1.1
TF k141_504 k141_504_44 44389 45399 + LacI
TC k141_504 k141_504_45 45471 46859 + 2.A.2.3.4
CAZyme k141_504 k141_504_46 46963 48327 + GH91
pfam k141_504 k141_504_47 48382 48696 - rhaM
pfam k141_504 k141_504_48 48693 49841 - Fe-ADH | Fe-ADH_2 | ADH_Fe_C
TC k141_504 k141_504_49 50002 51006 - 3.A.1.2.8
TC k141_504 k141_504_50 51003 52007 - 3.A.1.2.9
TC k141_504 k141_504_51 52007 53518 - 3.A.1.2.9
TC k141_504 k141_504_52 53656 54642 - 3.A.1.2.9
Gene ID: k141_504_30
Type: TC
Location: 30895 - 32262 (+)
Gene ID: k141_504_31
Type: pfam
Location: 32249 - 33091 (+)
Gene ID: k141_504_32
Type:
Location: 33148 - 33417 (+)
Gene ID: k141_504_33
Type: TC
Location: 33427 - 33864 (+)
Gene ID: k141_504_34
Type:
Location: 33861 - 34412 (+)
Gene ID: k141_504_35
Type: pfam
Location: 34544 - 35578 (+)
Gene ID: k141_504_36
Type: TC
Location: 35616 - 35939 (-)
Gene ID: k141_504_37
Type: TC
Location: 35939 - 36628 (-)
Gene ID: k141_504_38
Type: TF
Location: 36699 - 37247 (+)
Gene ID: k141_504_39
Type: TF
Location: 37323 - 38318 (+)
Gene ID: k141_504_40
Type: CAZyme
Location: 38433 - 40556 (+)
Gene ID: k141_504_41
Type: TC
Location: 40556 - 41863 (+)
Gene ID: k141_504_42
Type: pfam
Location: 41903 - 42496 (+)
Gene ID: k141_504_43
Type: TC
Location: 42599 - 43978 (+)
Gene ID: k141_504_44
Type: TF
Location: 44389 - 45399 (+)
Gene ID: k141_504_45
Type: TC
Location: 45471 - 46859 (+)
Gene ID: k141_504_46
Type: CAZyme
Location: 46963 - 48327 (+)
Gene ID: k141_504_47
Type: pfam
Location: 48382 - 48696 (-)
Gene ID: k141_504_48
Type: pfam
Location: 48693 - 49841 (-)
Gene ID: k141_504_49
Type: TC
Location: 50002 - 51006 (-)
Gene ID: k141_504_50
Type: TC
Location: 51003 - 52007 (-)
Gene ID: k141_504_51
Type: TC
Location: 52007 - 53518 (-)
Gene ID: k141_504_52
Type: TC
Location: 53656 - 54642 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
k141_504_31 vegetarian > omnivore 3.22806 0.01294
k141_504_31 vegetarian > vegan 3.23860 0.02041
k141_504_33 vegetarian > omnivore 1.78744 0.04907
k141_504_33 vegetarian > vegan 5.19726 0.02041
k141_504_37 vegetarian > omnivore 1.40251 0.01294
k141_504_38 vegetarian > omnivore 1.46003 0.04592
k141_504_38 vegetarian > vegan 2.60311 0.02041
k141_504_40 vegetarian > omnivore 1.72712 0.04592
k141_504_41 vegetarian > omnivore 2.47010 0.00779
k141_504_41 vegetarian > vegan 1.09380 0.03951
k141_504_47 vegetarian > omnivore 1.75249 0.01294
k141_504_48 vegetarian > omnivore 1.17729 0.00229
k141_504_48 vegan > omnivore 1.67959 0.03415
k141_504_50 vegetarian > vegan 1.20285 0.02041
k141_504_51 vegetarian > vegan 1.21761 0.02615
k141_504_52 vegetarian > omnivore 1.59196 0.04907

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