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Cluster: CGMR052682_CGC58

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_1287 k141_1287_104 118936 120303 + 2.A.3.1.3
TC k141_1287 k141_1287_105 120480 121886 + 2.A.2.3.4
CAZyme k141_1287 k141_1287_106 121886 122836 + GH43_26
TC k141_1287 k141_1287_107 122868 123722 - 9.B.125.1.1
pfam k141_1287 k141_1287_108 123732 124283 - Amidase_2
pfam k141_1287 k141_1287_109 124486 125379 + QRPTase_C | QRPTase_N
TC k141_1287 k141_1287_110 125563 125994 + 3.A.15.2.1
TC k141_1287 k141_1287_111 126005 127390 + 3.A.15.2.1
TC k141_1287 k141_1287_112 127380 128585 + 3.A.15.2.1
Gene ID: k141_1287_104
Type: TC
Location: 118936 - 120303 (+)
Gene ID: k141_1287_105
Type: TC
Location: 120480 - 121886 (+)
Gene ID: k141_1287_106
Type: CAZyme
Location: 121886 - 122836 (+)
Gene ID: k141_1287_107
Type: TC
Location: 122868 - 123722 (-)
Gene ID: k141_1287_108
Type: pfam
Location: 123732 - 124283 (-)
Gene ID: k141_1287_109
Type: pfam
Location: 124486 - 125379 (+)
Gene ID: k141_1287_110
Type: TC
Location: 125563 - 125994 (+)
Gene ID: k141_1287_111
Type: TC
Location: 126005 - 127390 (+)
Gene ID: k141_1287_112
Type: TC
Location: 127380 - 128585 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
k141_1287_106 vegan > omnivore 2.22295 0.02657
k141_1287_106 vegetarian > omnivore 1.81886 0.04907
k141_1287_109 vegetarian > omnivore 2.22370 0.00779
k141_1287_109 vegetarian > vegan 3.30316 0.00937

🧭 Explore Read Mapping of CGC

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