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Cluster: CGMR052682_CGC55

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_1287 k141_1287_44 49240 50040 + 3.A.1.13.1
TC k141_1287 k141_1287_45 50221 50844 + 1.A.62.2.2
pfam k141_1287 k141_1287_46 50932 51276 - Fe-S_biosyn
TC k141_1287 k141_1287_47 51358 52869 - 2.A.49.5.5
pfam k141_1287 k141_1287_48 52957 54237 + Aminotran_3
NULL(UNKNOWN) k141_1287 k141_1287_49 54449 54601 + NULL(UNKNOWN)
[View Structural Homologs]
TC k141_1287 k141_1287_50 54775 56757 - 3.A.1.14.3
TC k141_1287 k141_1287_51 56754 57644 - 3.A.1.14.3
TC k141_1287 k141_1287_52 57644 58441 - 3.A.1.14.3
TC k141_1287 k141_1287_53 58487 60691 - 1.B.14.1.2
CAZyme k141_1287 k141_1287_54 60966 63518 - GT51
TC k141_1287 k141_1287_55 64091 64468 + 8.A.2.1.1
pfam k141_1287 k141_1287_56 64498 65022 - T2SSB
CAZyme k141_1287 k141_1287_57 65094 68366 - CBM41 | GH13_13
TC k141_1287 k141_1287_58 68718 69557 + 3.A.15.1.1
TC k141_1287 k141_1287_59 69558 71540 + 1.B.22.1.1
TC k141_1287 k141_1287_60 71537 73030 + 3.A.15.1.1
TC k141_1287 k141_1287_61 73032 74234 + 3.A.15.1.1
TC k141_1287 k141_1287_62 74255 74677 + 3.A.15.1.1
TC k141_1287 k141_1287_63 74677 75189 + 3.A.15.1.1
TC k141_1287 k141_1287_64 75186 75551 + 3.A.15.1.1
TC k141_1287 k141_1287_65 75548 76144 + 3.A.15.1.1
TC k141_1287 k141_1287_66 76141 77121 + 3.A.15.1.1
TC k141_1287 k141_1287_67 77114 78310 + 3.A.15.1.1
TC k141_1287 k141_1287_68 78303 78788 + 3.A.15.1.1
TC k141_1287 k141_1287_69 78778 79536 + 3.A.15.1.1
TC k141_1287 k141_1287_70 79539 80336 + 3.A.15.1.1
Gene ID: k141_1287_44
Type: TC
Location: 49240 - 50040 (+)
Gene ID: k141_1287_45
Type: TC
Location: 50221 - 50844 (+)
Gene ID: k141_1287_46
Type: pfam
Location: 50932 - 51276 (-)
Gene ID: k141_1287_47
Type: TC
Location: 51358 - 52869 (-)
Gene ID: k141_1287_48
Type: pfam
Location: 52957 - 54237 (+)
Gene ID: k141_1287_49
Type:
Location: 54449 - 54601 (+)
Gene ID: k141_1287_50
Type: TC
Location: 54775 - 56757 (-)
Gene ID: k141_1287_51
Type: TC
Location: 56754 - 57644 (-)
Gene ID: k141_1287_52
Type: TC
Location: 57644 - 58441 (-)
Gene ID: k141_1287_53
Type: TC
Location: 58487 - 60691 (-)
Gene ID: k141_1287_54
Type: CAZyme
Location: 60966 - 63518 (-)
Gene ID: k141_1287_55
Type: TC
Location: 64091 - 64468 (+)
Gene ID: k141_1287_56
Type: pfam
Location: 64498 - 65022 (-)
Gene ID: k141_1287_57
Type: CAZyme
Location: 65094 - 68366 (-)
Gene ID: k141_1287_58
Type: TC
Location: 68718 - 69557 (+)
Gene ID: k141_1287_59
Type: TC
Location: 69558 - 71540 (+)
Gene ID: k141_1287_60
Type: TC
Location: 71537 - 73030 (+)
Gene ID: k141_1287_61
Type: TC
Location: 73032 - 74234 (+)
Gene ID: k141_1287_62
Type: TC
Location: 74255 - 74677 (+)
Gene ID: k141_1287_63
Type: TC
Location: 74677 - 75189 (+)
Gene ID: k141_1287_64
Type: TC
Location: 75186 - 75551 (+)
Gene ID: k141_1287_65
Type: TC
Location: 75548 - 76144 (+)
Gene ID: k141_1287_66
Type: TC
Location: 76141 - 77121 (+)
Gene ID: k141_1287_67
Type: TC
Location: 77114 - 78310 (+)
Gene ID: k141_1287_68
Type: TC
Location: 78303 - 78788 (+)
Gene ID: k141_1287_69
Type: TC
Location: 78778 - 79536 (+)
Gene ID: k141_1287_70
Type: TC
Location: 79539 - 80336 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
k141_1287_46 vegetarian > vegan 1.89711 0.01848

🧭 Explore Read Mapping of CGC

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