Cluster: CGMR052682_CGC50
🧬 Cluster Details
- Gene Count: 17
- CAZyme Count: 1
- Substrate:
- Genome ID: CGMR052682
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | k141_2706 | k141_2706_21 | 25809 | 26537 | + | GT51 |
| TC | k141_2706 | k141_2706_22 | 26588 | 26860 | - | 8.A.8.1.5 |
| pfam | k141_2706 | k141_2706_23 | 26857 | 27711 | - | RapZ-like_N | PapZ_C |
| TC | k141_2706 | k141_2706_24 | 27757 | 28245 | - | 4.A.2.1.4 |
| pfam | k141_2706 | k141_2706_25 | 28312 | 28599 | - | Ribosomal_S30AE |
| pfam | k141_2706 | k141_2706_26 | 28622 | 30055 | - | Sigma54_AID | Sigma54_DBD | Sigma54_CBD |
| TC | k141_2706 | k141_2706_27 | 30103 | 30828 | - | 1.B.42.1.2 |
| TC | k141_2706 | k141_2706_28 | 30835 | 31380 | - | 1.B.42.1.2 |
| TC | k141_2706 | k141_2706_29 | 31349 | 31924 | - | 1.B.42.1.2 |
| pfam | k141_2706 | k141_2706_30 | 31921 | 32487 | - | Hydrolase_3 |
| STP | k141_2706 | k141_2706_31 | 32502 | 33506 | - | CBS | CBS | SIS |
| TC | k141_2706 | k141_2706_32 | 33503 | 34480 | - | 2.A.19.5.1 |
| TC | k141_2706 | k141_2706_33 | 34690 | 35502 | + | 3.A.1.27.3 |
| TC | k141_2706 | k141_2706_34 | 35510 | 36292 | + | 3.A.1.27.3 |
| TC | k141_2706 | k141_2706_35 | 36297 | 36848 | + | 3.A.1.27.3 |
| TC | k141_2706 | k141_2706_36 | 36867 | 37502 | + | 3.A.1.27.3 |
| TC | k141_2706 | k141_2706_37 | 37502 | 37792 | + | 3.A.1.27.3 |
Gene ID: k141_2706_21
Type: CAZyme
Location: 25809 - 26537 (+)
Type: CAZyme
Location: 25809 - 26537 (+)
Gene ID: k141_2706_22
Type: TC
Location: 26588 - 26860 (-)
Type: TC
Location: 26588 - 26860 (-)
Gene ID: k141_2706_23
Type: pfam
Location: 26857 - 27711 (-)
Type: pfam
Location: 26857 - 27711 (-)
Gene ID: k141_2706_24
Type: TC
Location: 27757 - 28245 (-)
Type: TC
Location: 27757 - 28245 (-)
Gene ID: k141_2706_25
Type: pfam
Location: 28312 - 28599 (-)
Type: pfam
Location: 28312 - 28599 (-)
Gene ID: k141_2706_26
Type: pfam
Location: 28622 - 30055 (-)
Type: pfam
Location: 28622 - 30055 (-)
Gene ID: k141_2706_27
Type: TC
Location: 30103 - 30828 (-)
Type: TC
Location: 30103 - 30828 (-)
Gene ID: k141_2706_28
Type: TC
Location: 30835 - 31380 (-)
Type: TC
Location: 30835 - 31380 (-)
Gene ID: k141_2706_29
Type: TC
Location: 31349 - 31924 (-)
Type: TC
Location: 31349 - 31924 (-)
Gene ID: k141_2706_30
Type: pfam
Location: 31921 - 32487 (-)
Type: pfam
Location: 31921 - 32487 (-)
Gene ID: k141_2706_31
Type: STP
Location: 32502 - 33506 (-)
Type: STP
Location: 32502 - 33506 (-)
Gene ID: k141_2706_32
Type: TC
Location: 33503 - 34480 (-)
Type: TC
Location: 33503 - 34480 (-)
Gene ID: k141_2706_33
Type: TC
Location: 34690 - 35502 (+)
Type: TC
Location: 34690 - 35502 (+)
Gene ID: k141_2706_34
Type: TC
Location: 35510 - 36292 (+)
Type: TC
Location: 35510 - 36292 (+)
Gene ID: k141_2706_35
Type: TC
Location: 36297 - 36848 (+)
Type: TC
Location: 36297 - 36848 (+)
Gene ID: k141_2706_36
Type: TC
Location: 36867 - 37502 (+)
Type: TC
Location: 36867 - 37502 (+)
Gene ID: k141_2706_37
Type: TC
Location: 37502 - 37792 (+)
Type: TC
Location: 37502 - 37792 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Klebsiella
Species
Klebsiella oxytoca
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| k141_2706_31 | vegetarian > omnivore | 1.07209 | 0.04907 |