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Cluster: CGMR052682_CGC47

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_2167 k141_2167_201 213356 214948 + 4.A.1.1.3
STP k141_2167 k141_2167_202 214996 216168 + Aminotran_1_2
pfam k141_2167 k141_2167_203 216493 216696 + YdfZ
TC k141_2167 k141_2167_204 216885 218096 + 9.B.102.1.1
pfam k141_2167 k141_2167_205 218093 218326 + TusA
TC k141_2167 k141_2167_206 218409 219224 - 3.A.1.24.1
pfam k141_2167 k141_2167_207 219497 220498 + A_deaminase
pfam k141_2167 k141_2167_208 220561 221601 - GFO_IDH_MocA | GFO_IDH_MocA_C | GFO_IDH_MocA_C3
CAZyme k141_2167 k141_2167_209 222039 223409 + GH1
TF k141_2167 k141_2167_210 223582 223845 + HHA
pfam k141_2167 k141_2167_211 223926 224366 + DUF2569
TC k141_2167 k141_2167_212 224444 225025 + 3.D.6.1.4
TC k141_2167 k141_2167_213 225025 225603 + 3.D.6.1.4
TC k141_2167 k141_2167_214 225596 227569 + 3.D.6.1.4
TC k141_2167 k141_2167_215 227570 228622 + 3.D.6.1.4
TC k141_2167 k141_2167_216 228633 229253 + 3.D.6.1.4
TC k141_2167 k141_2167_217 229257 229955 + 3.D.6.1.4
STP k141_2167 k141_2167_218 229957 230592 + HhH-GPD
TC k141_2167 k141_2167_219 231034 232695 + 2.A.17.1.2
Gene ID: k141_2167_201
Type: TC
Location: 213356 - 214948 (+)
Gene ID: k141_2167_202
Type: STP
Location: 214996 - 216168 (+)
Gene ID: k141_2167_203
Type: pfam
Location: 216493 - 216696 (+)
Gene ID: k141_2167_204
Type: TC
Location: 216885 - 218096 (+)
Gene ID: k141_2167_205
Type: pfam
Location: 218093 - 218326 (+)
Gene ID: k141_2167_206
Type: TC
Location: 218409 - 219224 (-)
Gene ID: k141_2167_207
Type: pfam
Location: 219497 - 220498 (+)
Gene ID: k141_2167_208
Type: pfam
Location: 220561 - 221601 (-)
Gene ID: k141_2167_209
Type: CAZyme
Location: 222039 - 223409 (+)
Gene ID: k141_2167_210
Type: TF
Location: 223582 - 223845 (+)
Gene ID: k141_2167_211
Type: pfam
Location: 223926 - 224366 (+)
Gene ID: k141_2167_212
Type: TC
Location: 224444 - 225025 (+)
Gene ID: k141_2167_213
Type: TC
Location: 225025 - 225603 (+)
Gene ID: k141_2167_214
Type: TC
Location: 225596 - 227569 (+)
Gene ID: k141_2167_215
Type: TC
Location: 227570 - 228622 (+)
Gene ID: k141_2167_216
Type: TC
Location: 228633 - 229253 (+)
Gene ID: k141_2167_217
Type: TC
Location: 229257 - 229955 (+)
Gene ID: k141_2167_218
Type: STP
Location: 229957 - 230592 (+)
Gene ID: k141_2167_219
Type: TC
Location: 231034 - 232695 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
k141_2167_212 vegetarian > vegan 1.31866 0.04934

🧭 Explore Read Mapping of CGC

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