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Cluster: CGMR052682_CGC42

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme k141_1837 k141_1837_5 4687 5859 - GT4
NULL(UNKNOWN) k141_1837 k141_1837_6 5864 7036 - NULL(UNKNOWN)
[View Structural Homologs]
CAZyme k141_1837 k141_1837_7 7038 8117 - GT4
CAZyme k141_1837 k141_1837_8 8187 9047 - GT2
CAZyme k141_1837 k141_1837_9 9224 10135 - GT2
TC k141_1837 k141_1837_10 10172 11599 - 9.B.18.1.2
TC k141_1837 k141_1837_11 11733 13907 - 8.A.3.3.1
pfam k141_1837 k141_1837_12 13922 14239 - LMWPc
TC k141_1837 k141_1837_13 14359 15429 - 1.B.18.3.8
TC k141_1837 k141_1837_14 15572 17011 - 1.B.73.1.1
pfam k141_1837 k141_1837_15 18016 18645 - PAP2
pfam k141_1837 k141_1837_16 19105 19953 - NTP_transferase
TC k141_1837 k141_1837_17 20988 22574 + 2.A.109.2.3
TC k141_1837 k141_1837_18 22875 24722 - 9.B.22.2.1
Gene ID: k141_1837_5
Type: CAZyme
Location: 4687 - 5859 (-)
Gene ID: k141_1837_6
Type:
Location: 5864 - 7036 (-)
Gene ID: k141_1837_7
Type: CAZyme
Location: 7038 - 8117 (-)
Gene ID: k141_1837_8
Type: CAZyme
Location: 8187 - 9047 (-)
Gene ID: k141_1837_9
Type: CAZyme
Location: 9224 - 10135 (-)
Gene ID: k141_1837_10
Type: TC
Location: 10172 - 11599 (-)
Gene ID: k141_1837_11
Type: TC
Location: 11733 - 13907 (-)
Gene ID: k141_1837_12
Type: pfam
Location: 13922 - 14239 (-)
Gene ID: k141_1837_13
Type: TC
Location: 14359 - 15429 (-)
Gene ID: k141_1837_14
Type: TC
Location: 15572 - 17011 (-)
Gene ID: k141_1837_15
Type: pfam
Location: 18016 - 18645 (-)
Gene ID: k141_1837_16
Type: pfam
Location: 19105 - 19953 (-)
Gene ID: k141_1837_17
Type: TC
Location: 20988 - 22574 (+)
Gene ID: k141_1837_18
Type: TC
Location: 22875 - 24722 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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