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Cluster: CGMR052682_CGC36

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_1153 k141_1153_137 144587 145981 + 2.A.2.3.4
CAZyme k141_1153 k141_1153_138 145995 148313 + GH31_3
TF k141_1153 k141_1153_139 148661 149392 + HTH_6
CAZyme k141_1153 k141_1153_140 149489 150868 - GH4
TC k141_1153 k141_1153_141 150882 152441 - 4.A.1.1.16
pfam k141_1153 k141_1153_142 152708 154438 - AsmA
TC k141_1153 k141_1153_143 154584 155975 - 2.A.40.4.2
TC k141_1153 k141_1153_144 156262 157464 + 2.A.27.1.1
pfam k141_1153 k141_1153_145 157685 159196 - FGGY_N | FGGY_C
TC k141_1153 k141_1153_146 159218 160069 - 1.A.8.1.1
pfam k141_1153 k141_1153_147 160519 160758 + ZapB
TC k141_1153 k141_1153_148 160909 161898 + 3.A.1.6.1
pfam k141_1153 k141_1153_149 162116 162877 + CDH
TC k141_1153 k141_1153_150 163144 164478 + 2.A.2.3.7
Gene ID: k141_1153_137
Type: TC
Location: 144587 - 145981 (+)
Gene ID: k141_1153_138
Type: CAZyme
Location: 145995 - 148313 (+)
Gene ID: k141_1153_139
Type: TF
Location: 148661 - 149392 (+)
Gene ID: k141_1153_140
Type: CAZyme
Location: 149489 - 150868 (-)
Gene ID: k141_1153_141
Type: TC
Location: 150882 - 152441 (-)
Gene ID: k141_1153_142
Type: pfam
Location: 152708 - 154438 (-)
Gene ID: k141_1153_143
Type: TC
Location: 154584 - 155975 (-)
Gene ID: k141_1153_144
Type: TC
Location: 156262 - 157464 (+)
Gene ID: k141_1153_145
Type: pfam
Location: 157685 - 159196 (-)
Gene ID: k141_1153_146
Type: TC
Location: 159218 - 160069 (-)
Gene ID: k141_1153_147
Type: pfam
Location: 160519 - 160758 (+)
Gene ID: k141_1153_148
Type: TC
Location: 160909 - 161898 (+)
Gene ID: k141_1153_149
Type: pfam
Location: 162116 - 162877 (+)
Gene ID: k141_1153_150
Type: TC
Location: 163144 - 164478 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
k141_1153_137 vegetarian > omnivore 1.12518 0.04592

🧭 Explore Read Mapping of CGC

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