Cluster: CGMR052682_CGC31
🧬 Cluster Details
- Gene Count: 10
- CAZyme Count: 1
- Substrate:
- Genome ID: CGMR052682
- CGC Family ID: CGCFAM_00626
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | k141_2032 | k141_2032_144 | 148029 | 149426 | + | 3.A.9.1.1 |
| pfam | k141_2032 | k141_2032_145 | 149423 | 149809 | + | AtzH-like | DUF4440 |
| CAZyme | k141_2032 | k141_2032_146 | 149980 | 150912 | - | CE4 |
| pfam | k141_2032 | k141_2032_147 | 150929 | 151672 | - | Asp_Glu_race |
| TF | k141_2032 | k141_2032_148 | 151672 | 152388 | - | GntR |
| TC | k141_2032 | k141_2032_149 | 152532 | 154019 | + | 2.A.39.3.4 |
| peptidase | k141_2032 | k141_2032_150 | 154126 | 155448 | + | M38.UNW |
| TC | k141_2032 | k141_2032_151 | 155596 | 155922 | - | 9.B.35.2.1 |
| pfam | k141_2032 | k141_2032_152 | 155919 | 156419 | - | OHCU_decarbox |
| TC | k141_2032 | k141_2032_153 | 156397 | 157779 | - | 2.A.40.4.2 |
Gene ID: k141_2032_144
Type: TC
Location: 148029 - 149426 (+)
Type: TC
Location: 148029 - 149426 (+)
Gene ID: k141_2032_145
Type: pfam
Location: 149423 - 149809 (+)
Type: pfam
Location: 149423 - 149809 (+)
Gene ID: k141_2032_146
Type: CAZyme
Location: 149980 - 150912 (-)
Type: CAZyme
Location: 149980 - 150912 (-)
Gene ID: k141_2032_147
Type: pfam
Location: 150929 - 151672 (-)
Type: pfam
Location: 150929 - 151672 (-)
Gene ID: k141_2032_148
Type: TF
Location: 151672 - 152388 (-)
Type: TF
Location: 151672 - 152388 (-)
Gene ID: k141_2032_149
Type: TC
Location: 152532 - 154019 (+)
Type: TC
Location: 152532 - 154019 (+)
Gene ID: k141_2032_150
Type: peptidase
Location: 154126 - 155448 (+)
Type: peptidase
Location: 154126 - 155448 (+)
Gene ID: k141_2032_151
Type: TC
Location: 155596 - 155922 (-)
Type: TC
Location: 155596 - 155922 (-)
Gene ID: k141_2032_152
Type: pfam
Location: 155919 - 156419 (-)
Type: pfam
Location: 155919 - 156419 (-)
Gene ID: k141_2032_153
Type: TC
Location: 156397 - 157779 (-)
Type: TC
Location: 156397 - 157779 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Klebsiella
Species
Klebsiella oxytoca
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.