Cluster: CGMR052682_CGC30
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 1
- Substrate:
- Genome ID: CGMR052682
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | k141_2032 | k141_2032_133 | 137139 | 137840 | + | 1.B.35.1.1 |
| CAZyme | k141_2032 | k141_2032_134 | 137913 | 139622 | + | PL2_1 |
| peptidase | k141_2032 | k141_2032_135 | 139679 | 140941 | - | M20.UPW |
| pfam | k141_2032 | k141_2032_136 | 140938 | 142179 | - | Aminotran_5 |
| TC | k141_2032 | k141_2032_137 | 142190 | 142930 | - | 3.A.1.3.21 |
| TC | k141_2032 | k141_2032_138 | 142911 | 143588 | - | 3.A.1.3.10 |
| TC | k141_2032 | k141_2032_139 | 143567 | 144232 | - | 3.A.1.3.6 |
Gene ID: k141_2032_133
Type: TC
Location: 137139 - 137840 (+)
Type: TC
Location: 137139 - 137840 (+)
Gene ID: k141_2032_134
Type: CAZyme
Location: 137913 - 139622 (+)
Type: CAZyme
Location: 137913 - 139622 (+)
Gene ID: k141_2032_135
Type: peptidase
Location: 139679 - 140941 (-)
Type: peptidase
Location: 139679 - 140941 (-)
Gene ID: k141_2032_136
Type: pfam
Location: 140938 - 142179 (-)
Type: pfam
Location: 140938 - 142179 (-)
Gene ID: k141_2032_137
Type: TC
Location: 142190 - 142930 (-)
Type: TC
Location: 142190 - 142930 (-)
Gene ID: k141_2032_138
Type: TC
Location: 142911 - 143588 (-)
Type: TC
Location: 142911 - 143588 (-)
Gene ID: k141_2032_139
Type: TC
Location: 143567 - 144232 (-)
Type: TC
Location: 143567 - 144232 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Klebsiella
Species
Klebsiella oxytoca
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| k141_2032_136 | vegetarian > omnivore | 2.39212 | 0.04592 |
| k141_2032_136 | vegetarian > vegan | 4.15202 | 0.01567 |
| k141_2032_137 | vegetarian > omnivore | 1.46593 | 0.01294 |
| k141_2032_138 | vegan > omnivore | 2.83883 | 0.02657 |
| k141_2032_138 | vegetarian > omnivore | 3.57496 | 0.04592 |