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Cluster: CGMR052682_CGC24

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_2793 k141_2793_28 26900 28387 + 3.A.1.2.8
TC k141_2793 k141_2793_29 28384 29418 + 3.A.1.2.8
TC k141_2793 k141_2793_30 29419 30396 + 3.A.1.2.8
TC k141_2793 k141_2793_31 30420 31433 + 3.A.1.2.8
pfam k141_2793 k141_2793_32 31445 32332 + DeoC
pfam k141_2793 k141_2793_33 32329 32625 + ABM
CAZyme k141_2793 k141_2793_34 32722 35073 - GH63
NULL(UNKNOWN) k141_2793 k141_2793_35 35090 36151 - NULL(UNKNOWN)
[View Structural Homologs]
TC k141_2793 k141_2793_36 36253 37626 - 2.A.3.7.4
TC k141_2793 k141_2793_37 37855 39288 - 2.A.3.7.4
pfam k141_2793 k141_2793_38 39382 39831 - DUF386
CAZyme k141_2793 k141_2793_39 39828 42920 - GH2
Gene ID: k141_2793_28
Type: TC
Location: 26900 - 28387 (+)
Gene ID: k141_2793_29
Type: TC
Location: 28384 - 29418 (+)
Gene ID: k141_2793_30
Type: TC
Location: 29419 - 30396 (+)
Gene ID: k141_2793_31
Type: TC
Location: 30420 - 31433 (+)
Gene ID: k141_2793_32
Type: pfam
Location: 31445 - 32332 (+)
Gene ID: k141_2793_33
Type: pfam
Location: 32329 - 32625 (+)
Gene ID: k141_2793_34
Type: CAZyme
Location: 32722 - 35073 (-)
Gene ID: k141_2793_35
Type:
Location: 35090 - 36151 (-)
Gene ID: k141_2793_36
Type: TC
Location: 36253 - 37626 (-)
Gene ID: k141_2793_37
Type: TC
Location: 37855 - 39288 (-)
Gene ID: k141_2793_38
Type: pfam
Location: 39382 - 39831 (-)
Gene ID: k141_2793_39
Type: CAZyme
Location: 39828 - 42920 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
k141_2793_28 vegetarian > omnivore 1.66394 0.04907
k141_2793_31 vegan > omnivore 1.20653 0.03209
k141_2793_32 vegetarian > omnivore 1.24086 0.04907

🧭 Explore Read Mapping of CGC

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