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Cluster: CGMR052682_CGC21

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_2759 k141_2759_169 188341 189084 - 9.B.158.1.2
pfam k141_2759 k141_2759_170 189161 189730 - YecM
pfam k141_2759 k141_2759_171 189960 191693 + tRNA-synt_1d | Arg_tRNA_synt_N | DALR_1
CAZyme k141_2759 k141_2759_172 191770 192909 - GH105
TC k141_2759 k141_2759_173 192914 194497 - 2.A.2.5.2
pfam k141_2759 k141_2759_174 194863 195291 + Usp
CAZyme k141_2759 k141_2759_175 195320 196744 - GT20
pfam k141_2759 k141_2759_176 196719 197522 - Trehalose_PPase
TC k141_2759 k141_2759_177 197681 198661 - 3.A.1.2.2
TC k141_2759 k141_2759_178 198676 200190 - 3.A.1.2.2
TC k141_2759 k141_2759_179 200252 201232 - 3.A.1.2.2
peptidase k141_2759 k141_2759_180 201521 202063 - C56.UNW
pfam k141_2759 k141_2759_181 202626 203168 + Ferritin
TC k141_2759 k141_2759_182 203401 204963 + 2.A.2.5.1
pfam k141_2759 k141_2759_183 205010 205261 - DUF2766
TC k141_2759 k141_2759_184 205708 207054 + 2.A.1.3.51
Gene ID: k141_2759_169
Type: TC
Location: 188341 - 189084 (-)
Gene ID: k141_2759_170
Type: pfam
Location: 189161 - 189730 (-)
Gene ID: k141_2759_171
Type: pfam
Location: 189960 - 191693 (+)
Gene ID: k141_2759_172
Type: CAZyme
Location: 191770 - 192909 (-)
Gene ID: k141_2759_173
Type: TC
Location: 192914 - 194497 (-)
Gene ID: k141_2759_174
Type: pfam
Location: 194863 - 195291 (+)
Gene ID: k141_2759_175
Type: CAZyme
Location: 195320 - 196744 (-)
Gene ID: k141_2759_176
Type: pfam
Location: 196719 - 197522 (-)
Gene ID: k141_2759_177
Type: TC
Location: 197681 - 198661 (-)
Gene ID: k141_2759_178
Type: TC
Location: 198676 - 200190 (-)
Gene ID: k141_2759_179
Type: TC
Location: 200252 - 201232 (-)
Gene ID: k141_2759_180
Type: peptidase
Location: 201521 - 202063 (-)
Gene ID: k141_2759_181
Type: pfam
Location: 202626 - 203168 (+)
Gene ID: k141_2759_182
Type: TC
Location: 203401 - 204963 (+)
Gene ID: k141_2759_183
Type: pfam
Location: 205010 - 205261 (-)
Gene ID: k141_2759_184
Type: TC
Location: 205708 - 207054 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
k141_2759_172 vegan > omnivore 1.88320 0.04974
k141_2759_172 vegetarian > omnivore 2.29776 0.00688
k141_2759_173 vegetarian > omnivore 2.42872 0.00779
k141_2759_179 vegan > omnivore 1.00687 0.03818

🧭 Explore Read Mapping of CGC

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