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Cluster: CGMR052682_CGC16

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_1274 k141_1274_321 336368 337258 + 3.A.1.1.11
TC k141_1274 k141_1274_322 337251 338153 + 3.A.1.1.11
TC k141_1274 k141_1274_323 338166 339293 + 3.A.1.1.11
TC k141_1274 k141_1274_324 339310 340596 + 3.A.1.1.11
CAZyme k141_1274 k141_1274_325 340668 341795 + PL22 | PL22_1
TC k141_1274 k141_1274_326 342263 343609 - 1.B.15.1.1
CAZyme k141_1274 k141_1274_327 343723 345156 - GH32
TC k141_1274 k141_1274_328 345175 346416 - 2.A.1.5.2
TF k141_1274 k141_1274_329 346658 347653 + LacI
TC k141_1274 k141_1274_330 347654 349072 - 2.A.1.1.2
pfam k141_1274 k141_1274_331 349384 350145 - adh_short | adh_short_C2
CAZyme k141_1274 k141_1274_332 350688 351863 + PL22 | PL22
TC k141_1274 k141_1274_333 352095 352790 - 1.B.35.1.7
pfam k141_1274 k141_1274_334 353034 354209 - Thiolase_N | ketoacyl-synt | Thiolase_C
TF k141_1274 k141_1274_335 354500 355372 - HTH_1
TC k141_1274 k141_1274_336 355469 355930 + 2.A.117.1.3
TC k141_1274 k141_1274_337 356066 357295 + 2.A.42.2.5
Gene ID: k141_1274_321
Type: TC
Location: 336368 - 337258 (+)
Gene ID: k141_1274_322
Type: TC
Location: 337251 - 338153 (+)
Gene ID: k141_1274_323
Type: TC
Location: 338166 - 339293 (+)
Gene ID: k141_1274_324
Type: TC
Location: 339310 - 340596 (+)
Gene ID: k141_1274_325
Type: CAZyme
Location: 340668 - 341795 (+)
Gene ID: k141_1274_326
Type: TC
Location: 342263 - 343609 (-)
Gene ID: k141_1274_327
Type: CAZyme
Location: 343723 - 345156 (-)
Gene ID: k141_1274_328
Type: TC
Location: 345175 - 346416 (-)
Gene ID: k141_1274_329
Type: TF
Location: 346658 - 347653 (+)
Gene ID: k141_1274_330
Type: TC
Location: 347654 - 349072 (-)
Gene ID: k141_1274_331
Type: pfam
Location: 349384 - 350145 (-)
Gene ID: k141_1274_332
Type: CAZyme
Location: 350688 - 351863 (+)
Gene ID: k141_1274_333
Type: TC
Location: 352095 - 352790 (-)
Gene ID: k141_1274_334
Type: pfam
Location: 353034 - 354209 (-)
Gene ID: k141_1274_335
Type: TF
Location: 354500 - 355372 (-)
Gene ID: k141_1274_336
Type: TC
Location: 355469 - 355930 (+)
Gene ID: k141_1274_337
Type: TC
Location: 356066 - 357295 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
k141_1274_322 vegetarian > omnivore 1.08859 0.04907
k141_1274_324 vegetarian > omnivore 1.25224 0.04907
k141_1274_332 vegetarian > omnivore 1.57253 0.04907
k141_1274_332 vegetarian > vegan 3.17352 0.02041

🧭 Explore Read Mapping of CGC

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