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Cluster: CGMR052682_CGC12

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_1274 k141_1274_102 99836 100849 - 2.A.52.1.1
pfam k141_1274 k141_1274_103 100861 103080 - Acylphosphatase | Sua5_yciO_yrdC | zf-HYPF | zf-HYPF | HypF_C | HypF_C_2
TC k141_1274 k141_1274_104 103093 103620 - 5.A.3.3.1
TF k141_1274 k141_1274_105 103755 104768 - LacI
TC k141_1274 k141_1274_106 105025 106467 + 4.A.1.2.3
CAZyme k141_1274 k141_1274_107 106494 107918 + GH1
peptidase k141_1274 k141_1274_108 108180 108665 - A31.003
pfam k141_1274 k141_1274_109 108658 109068 - HycH
TC k141_1274 k141_1274_110 109065 109832 - 3.D.1.9.2
TC k141_1274 k141_1274_111 109832 110374 - 3.D.1.9.2
TC k141_1274 k141_1274_112 110384 112093 - 3.D.1.9.2
TC k141_1274 k141_1274_113 112111 113034 - 3.D.1.9.2
TC k141_1274 k141_1274_114 113037 114863 - 3.D.1.9.2
TC k141_1274 k141_1274_115 114860 115468 - 3.D.1.9.2
Gene ID: k141_1274_102
Type: TC
Location: 99836 - 100849 (-)
Gene ID: k141_1274_103
Type: pfam
Location: 100861 - 103080 (-)
Gene ID: k141_1274_104
Type: TC
Location: 103093 - 103620 (-)
Gene ID: k141_1274_105
Type: TF
Location: 103755 - 104768 (-)
Gene ID: k141_1274_106
Type: TC
Location: 105025 - 106467 (+)
Gene ID: k141_1274_107
Type: CAZyme
Location: 106494 - 107918 (+)
Gene ID: k141_1274_108
Type: peptidase
Location: 108180 - 108665 (-)
Gene ID: k141_1274_109
Type: pfam
Location: 108658 - 109068 (-)
Gene ID: k141_1274_110
Type: TC
Location: 109065 - 109832 (-)
Gene ID: k141_1274_111
Type: TC
Location: 109832 - 110374 (-)
Gene ID: k141_1274_112
Type: TC
Location: 110384 - 112093 (-)
Gene ID: k141_1274_113
Type: TC
Location: 112111 - 113034 (-)
Gene ID: k141_1274_114
Type: TC
Location: 113037 - 114863 (-)
Gene ID: k141_1274_115
Type: TC
Location: 114860 - 115468 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
k141_1274_105 vegetarian > omnivore 1.52715 0.04907

🧭 Explore Read Mapping of CGC

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