dbCAN Logo

Cluster: CGMR052682_CGC1

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_2381 k141_2381_17 14878 16482 - 1.B.3.1.2
TC k141_2381 k141_2381_18 16527 17909 - 2.A.2.3.3
CAZyme k141_2381 k141_2381_19 17936 19507 - GH78
TF k141_2381 k141_2381_20 19711 20535 + HTH_AraC
pfam k141_2381 k141_2381_21 20693 21274 - Flavin_Reduct
TC k141_2381 k141_2381_22 21488 22189 + 3.A.1.1.16
TC k141_2381 k141_2381_23 22186 23154 + 3.A.1.20.3
TC k141_2381 k141_2381_24 23311 24966 + 3.A.1.20.1
pfam k141_2381 k141_2381_25 25043 25888 + Acetyltransf_2
TC k141_2381 k141_2381_26 26049 26729 - 5.A.3.1.2
pfam k141_2381 k141_2381_27 26726 27421 - Nitrate_red_del
TC k141_2381 k141_2381_28 27421 28965 - 5.A.3.1.2
TC k141_2381 k141_2381_29 28962 32702 - 5.A.3.1.2
TC k141_2381 k141_2381_30 32797 34185 - 2.A.1.8.10
STP k141_2381 k141_2381_31 34376 34951 - TetR_N
TC k141_2381 k141_2381_32 35071 36561 + 2.A.1.3.14
Gene ID: k141_2381_17
Type: TC
Location: 14878 - 16482 (-)
Gene ID: k141_2381_18
Type: TC
Location: 16527 - 17909 (-)
Gene ID: k141_2381_19
Type: CAZyme
Location: 17936 - 19507 (-)
Gene ID: k141_2381_20
Type: TF
Location: 19711 - 20535 (+)
Gene ID: k141_2381_21
Type: pfam
Location: 20693 - 21274 (-)
Gene ID: k141_2381_22
Type: TC
Location: 21488 - 22189 (+)
Gene ID: k141_2381_23
Type: TC
Location: 22186 - 23154 (+)
Gene ID: k141_2381_24
Type: TC
Location: 23311 - 24966 (+)
Gene ID: k141_2381_25
Type: pfam
Location: 25043 - 25888 (+)
Gene ID: k141_2381_26
Type: TC
Location: 26049 - 26729 (-)
Gene ID: k141_2381_27
Type: pfam
Location: 26726 - 27421 (-)
Gene ID: k141_2381_28
Type: TC
Location: 27421 - 28965 (-)
Gene ID: k141_2381_29
Type: TC
Location: 28962 - 32702 (-)
Gene ID: k141_2381_30
Type: TC
Location: 32797 - 34185 (-)
Gene ID: k141_2381_31
Type: STP
Location: 34376 - 34951 (-)
Gene ID: k141_2381_32
Type: TC
Location: 35071 - 36561 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

← Back to Cluster List