Cluster: CGMR052643_CGC43
🧬 Cluster Details
- Gene Count: 15
- CAZyme Count: 7
- Substrate:
- Genome ID: CGMR052643
- CGC Family ID: CGCFAM_05633
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | k141_25202 | k141_25202_24 | 25026 | 26423 | + | GH1 |
| STP | k141_25202 | k141_25202_25 | 26655 | 27956 | + | SBP_bac_1 |
| TC | k141_25202 | k141_25202_26 | 28096 | 28980 | + | 3.A.1.1.36 |
| TC | k141_25202 | k141_25202_27 | 28970 | 29860 | + | 3.A.1.1.2 |
| NULL(UNKNOWN) | k141_25202 | k141_25202_28 | 29870 | 30475 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| pfam | k141_25202 | k141_25202_29 | 30680 | 31852 | + | GlcNAc_2-epim |
| CAZyme | k141_25202 | k141_25202_30 | 31856 | 33034 | + | GH130_1 |
| NULL(UNKNOWN) | k141_25202 | k141_25202_31 | 33167 | 33751 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| pfam | k141_25202 | k141_25202_32 | 33957 | 35252 | + | Enolase_C | Enolase_N |
| CAZyme | k141_25202 | k141_25202_33 | 35455 | 36561 | + | CBM35inCE17 | CE17 |
| CAZyme | k141_25202 | k141_25202_34 | 36573 | 37655 | + | CE2 |
| CAZyme | k141_25202 | k141_25202_35 | 37888 | 38907 | + | GH130_2 |
| CAZyme | k141_25202 | k141_25202_36 | 39342 | 40415 | + | GT28 |
| CAZyme | k141_25202 | k141_25202_37 | 40418 | 41101 | + | CE4 |
| TC | k141_25202 | k141_25202_38 | 41094 | 42173 | + | 4.D.2.1.5 |
Gene ID: k141_25202_24
Type: CAZyme
Location: 25026 - 26423 (+)
Type: CAZyme
Location: 25026 - 26423 (+)
Gene ID: k141_25202_25
Type: STP
Location: 26655 - 27956 (+)
Type: STP
Location: 26655 - 27956 (+)
Gene ID: k141_25202_26
Type: TC
Location: 28096 - 28980 (+)
Type: TC
Location: 28096 - 28980 (+)
Gene ID: k141_25202_27
Type: TC
Location: 28970 - 29860 (+)
Type: TC
Location: 28970 - 29860 (+)
Gene ID: k141_25202_28
Type:
Location: 29870 - 30475 (+)
Type:
Location: 29870 - 30475 (+)
Gene ID: k141_25202_29
Type: pfam
Location: 30680 - 31852 (+)
Type: pfam
Location: 30680 - 31852 (+)
Gene ID: k141_25202_30
Type: CAZyme
Location: 31856 - 33034 (+)
Type: CAZyme
Location: 31856 - 33034 (+)
Gene ID: k141_25202_31
Type:
Location: 33167 - 33751 (+)
Type:
Location: 33167 - 33751 (+)
Gene ID: k141_25202_32
Type: pfam
Location: 33957 - 35252 (+)
Type: pfam
Location: 33957 - 35252 (+)
Gene ID: k141_25202_33
Type: CAZyme
Location: 35455 - 36561 (+)
Type: CAZyme
Location: 35455 - 36561 (+)
Gene ID: k141_25202_34
Type: CAZyme
Location: 36573 - 37655 (+)
Type: CAZyme
Location: 36573 - 37655 (+)
Gene ID: k141_25202_35
Type: CAZyme
Location: 37888 - 38907 (+)
Type: CAZyme
Location: 37888 - 38907 (+)
Gene ID: k141_25202_36
Type: CAZyme
Location: 39342 - 40415 (+)
Type: CAZyme
Location: 39342 - 40415 (+)
Gene ID: k141_25202_37
Type: CAZyme
Location: 40418 - 41101 (+)
Type: CAZyme
Location: 40418 - 41101 (+)
Gene ID: k141_25202_38
Type: TC
Location: 41094 - 42173 (+)
Type: TC
Location: 41094 - 42173 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Clostridiales
Family
Clostridiaceae
Genus
Clostridium
Species
Clostridium cuniculi
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
No differentially abundant genes found in the 2019 study.