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Cluster: CGMR052643_CGC4

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme k141_29095 k141_29095_15 15519 16517 + CE4
CAZyme k141_29095 k141_29095_16 16720 17724 + CE4
STP k141_29095 k141_29095_17 17758 18315 - CYTH
TF k141_29095 k141_29095_18 18533 18895 + GntR
TC k141_29095 k141_29095_19 18900 19772 + 3.A.1.132.1
NULL(UNKNOWN) k141_29095 k141_29095_20 19774 20520 + NULL(UNKNOWN)
[View Structural Homologs]
pfam k141_29095 k141_29095_21 20801 21643 + PRD | PRD | CAT_RBD
TC k141_29095 k141_29095_22 21773 23695 + 4.A.1.2.6
CAZyme k141_29095 k141_29095_23 23783 25207 + GH1
TC k141_29095 k141_29095_24 25270 26631 - 2.A.23.1.5
Gene ID: k141_29095_15
Type: CAZyme
Location: 15519 - 16517 (+)
Gene ID: k141_29095_16
Type: CAZyme
Location: 16720 - 17724 (+)
Gene ID: k141_29095_17
Type: STP
Location: 17758 - 18315 (-)
Gene ID: k141_29095_18
Type: TF
Location: 18533 - 18895 (+)
Gene ID: k141_29095_19
Type: TC
Location: 18900 - 19772 (+)
Gene ID: k141_29095_20
Type:
Location: 19774 - 20520 (+)
Gene ID: k141_29095_21
Type: pfam
Location: 20801 - 21643 (+)
Gene ID: k141_29095_22
Type: TC
Location: 21773 - 23695 (+)
Gene ID: k141_29095_23
Type: CAZyme
Location: 23783 - 25207 (+)
Gene ID: k141_29095_24
Type: TC
Location: 25270 - 26631 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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