Cluster: CGMR052643_CGC28
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate: alpha-glucan
- Genome ID: CGMR052643
- CGC Family ID: CGCFAM_00160
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | k141_13590 | k141_13590_11 | 12823 | 14187 | - | 2.A.66.1.33 |
| TF | k141_13590 | k141_13590_12 | 14342 | 15052 | - | GntR |
| CAZyme | k141_13590 | k141_13590_13 | 15088 | 16812 | - | GH13_29 |
| TC | k141_13590 | k141_13590_14 | 16850 | 18256 | - | 4.A.1.2.13 |
| NULL(UNKNOWN) | k141_13590 | k141_13590_15 | 18433 | 18777 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | k141_13590 | k141_13590_16 | 18767 | 20692 | - | 2.A.67.4.2 |
Gene ID: k141_13590_11
Type: TC
Location: 12823 - 14187 (-)
Type: TC
Location: 12823 - 14187 (-)
Gene ID: k141_13590_12
Type: TF
Location: 14342 - 15052 (-)
Type: TF
Location: 14342 - 15052 (-)
Gene ID: k141_13590_13
Type: CAZyme
Location: 15088 - 16812 (-)
Type: CAZyme
Location: 15088 - 16812 (-)
Gene ID: k141_13590_14
Type: TC
Location: 16850 - 18256 (-)
Type: TC
Location: 16850 - 18256 (-)
Gene ID: k141_13590_15
Type:
Location: 18433 - 18777 (-)
Type:
Location: 18433 - 18777 (-)
Gene ID: k141_13590_16
Type: TC
Location: 18767 - 20692 (-)
Type: TC
Location: 18767 - 20692 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Clostridiales
Family
Clostridiaceae
Genus
Clostridium
Species
Clostridium cuniculi
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.