Cluster: CGMR052643_CGC25
🧬 Cluster Details
- Gene Count: 8
- CAZyme Count: 2
- Substrate:
- Genome ID: CGMR052643
- CGC Family ID: CGCFAM_00585
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | k141_2703 | k141_2703_2 | 468 | 2207 | - | 8.A.59.2.1 |
| pfam | k141_2703 | k141_2703_3 | 2418 | 3077 | + | DUF624 |
| pfam | k141_2703 | k141_2703_4 | 3245 | 4156 | - | ROK |
| CAZyme | k141_2703 | k141_2703_5 | 4241 | 7387 | - | GH38 |
| CAZyme | k141_2703 | k141_2703_6 | 7584 | 9662 | - | GH42 |
| STP | k141_2703 | k141_2703_7 | 9929 | 11470 | - | SBP_bac_1 |
| TC | k141_2703 | k141_2703_8 | 11542 | 12438 | - | 3.A.1.1.29 |
| TC | k141_2703 | k141_2703_9 | 12449 | 13444 | - | 3.A.1.1.10 |
Gene ID: k141_2703_2
Type: TC
Location: 468 - 2207 (-)
Type: TC
Location: 468 - 2207 (-)
Gene ID: k141_2703_3
Type: pfam
Location: 2418 - 3077 (+)
Type: pfam
Location: 2418 - 3077 (+)
Gene ID: k141_2703_4
Type: pfam
Location: 3245 - 4156 (-)
Type: pfam
Location: 3245 - 4156 (-)
Gene ID: k141_2703_5
Type: CAZyme
Location: 4241 - 7387 (-)
Type: CAZyme
Location: 4241 - 7387 (-)
Gene ID: k141_2703_6
Type: CAZyme
Location: 7584 - 9662 (-)
Type: CAZyme
Location: 7584 - 9662 (-)
Gene ID: k141_2703_7
Type: STP
Location: 9929 - 11470 (-)
Type: STP
Location: 9929 - 11470 (-)
Gene ID: k141_2703_8
Type: TC
Location: 11542 - 12438 (-)
Type: TC
Location: 11542 - 12438 (-)
Gene ID: k141_2703_9
Type: TC
Location: 12449 - 13444 (-)
Type: TC
Location: 12449 - 13444 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Clostridiales
Family
Clostridiaceae
Genus
Clostridium
Species
Clostridium cuniculi
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.