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Cluster: CGMR052643_CGC23

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_16369 k141_16369_3 2180 3622 - 2.A.118.1.8
TF k141_16369 k141_16369_4 4179 4883 - GntR
TC k141_16369 k141_16369_5 5083 5409 - 4.A.3.2.2
pfam k141_16369 k141_16369_6 5422 6156 - YdjC
CAZyme k141_16369 k141_16369_7 6221 7525 - GH4
TC k141_16369 k141_16369_8 7779 9089 - 4.A.3.2.8
TC k141_16369 k141_16369_9 9187 9492 - 4.A.3.2.8
pfam k141_16369 k141_16369_10 9919 10389 - Y1_Tnp
pfam k141_16369 k141_16369_11 10602 12695 - UvrD-helicase | AAA_19
TC k141_16369 k141_16369_12 12819 14909 - 3.A.16.1.2
Gene ID: k141_16369_3
Type: TC
Location: 2180 - 3622 (-)
Gene ID: k141_16369_4
Type: TF
Location: 4179 - 4883 (-)
Gene ID: k141_16369_5
Type: TC
Location: 5083 - 5409 (-)
Gene ID: k141_16369_6
Type: pfam
Location: 5422 - 6156 (-)
Gene ID: k141_16369_7
Type: CAZyme
Location: 6221 - 7525 (-)
Gene ID: k141_16369_8
Type: TC
Location: 7779 - 9089 (-)
Gene ID: k141_16369_9
Type: TC
Location: 9187 - 9492 (-)
Gene ID: k141_16369_10
Type: pfam
Location: 9919 - 10389 (-)
Gene ID: k141_16369_11
Type: pfam
Location: 10602 - 12695 (-)
Gene ID: k141_16369_12
Type: TC
Location: 12819 - 14909 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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