Cluster: CGMR052643_CGC22
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 3
- Substrate:
- Genome ID: CGMR052643
- CGC Family ID: CGCFAM_01781
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | k141_18056 | k141_18056_25 | 21878 | 23830 | - | GH42 |
| TC | k141_18056 | k141_18056_26 | 23984 | 25363 | - | 2.A.2.1.1 |
| CAZyme | k141_18056 | k141_18056_27 | 25660 | 27726 | - | GH36 |
| TF | k141_18056 | k141_18056_28 | 27914 | 28927 | - | LacI |
| TC | k141_18056 | k141_18056_29 | 29105 | 30511 | - | 2.A.66.1.33 |
| CAZyme | k141_18056 | k141_18056_30 | 30730 | 32715 | - | GH127 |
Gene ID: k141_18056_25
Type: CAZyme
Location: 21878 - 23830 (-)
Type: CAZyme
Location: 21878 - 23830 (-)
Gene ID: k141_18056_26
Type: TC
Location: 23984 - 25363 (-)
Type: TC
Location: 23984 - 25363 (-)
Gene ID: k141_18056_27
Type: CAZyme
Location: 25660 - 27726 (-)
Type: CAZyme
Location: 25660 - 27726 (-)
Gene ID: k141_18056_28
Type: TF
Location: 27914 - 28927 (-)
Type: TF
Location: 27914 - 28927 (-)
Gene ID: k141_18056_29
Type: TC
Location: 29105 - 30511 (-)
Type: TC
Location: 29105 - 30511 (-)
Gene ID: k141_18056_30
Type: CAZyme
Location: 30730 - 32715 (-)
Type: CAZyme
Location: 30730 - 32715 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Clostridiales
Family
Clostridiaceae
Genus
Clostridium
Species
Clostridium cuniculi
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.