Cluster: CGMR052643_CGC17
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 2
- Substrate: host glycan/beta-glucan
- Genome ID: CGMR052643
- CGC Family ID: CGCFAM_00020
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | k141_3513 | k141_3513_4 | 5012 | 7273 | + | GT35 |
| NULL(UNKNOWN) | k141_3513 | k141_3513_5 | 7386 | 7730 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| pfam | k141_3513 | k141_3513_6 | 7919 | 8257 | + | PRD |
| TC | k141_3513 | k141_3513_7 | 8512 | 10386 | + | 4.A.1.2.11 |
| CAZyme | k141_3513 | k141_3513_8 | 10482 | 11891 | + | GH1 |
Gene ID: k141_3513_4
Type: CAZyme
Location: 5012 - 7273 (+)
Type: CAZyme
Location: 5012 - 7273 (+)
Gene ID: k141_3513_5
Type:
Location: 7386 - 7730 (-)
Type:
Location: 7386 - 7730 (-)
Gene ID: k141_3513_6
Type: pfam
Location: 7919 - 8257 (+)
Type: pfam
Location: 7919 - 8257 (+)
Gene ID: k141_3513_7
Type: TC
Location: 8512 - 10386 (+)
Type: TC
Location: 8512 - 10386 (+)
Gene ID: k141_3513_8
Type: CAZyme
Location: 10482 - 11891 (+)
Type: CAZyme
Location: 10482 - 11891 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Clostridiales
Family
Clostridiaceae
Genus
Clostridium
Species
Clostridium cuniculi
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.