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Cluster: CGMR052643_CGC15

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_6552 k141_6552_1 390 2300 + 9.B.18.2.1
STP k141_6552 k141_6552_2 2300 3493 + Aminotran_1_2
TC k141_6552 k141_6552_3 3602 4198 + 9.B.18.1.3
pfam k141_6552 k141_6552_4 4306 5040 + Wzz
TC k141_6552 k141_6552_5 4991 5668 + 8.A.3.1.2
pfam k141_6552 k141_6552_6 5687 6376 + PglD_N
CAZyme k141_6552 k141_6552_7 6345 7505 + GT4
CAZyme k141_6552 k141_6552_8 7586 8692 + GT4
NULL(UNKNOWN) k141_6552 k141_6552_9 8710 9957 + NULL(UNKNOWN)
[View Structural Homologs]
CAZyme k141_6552 k141_6552_10 9951 11036 + GT4
CAZyme k141_6552 k141_6552_11 11057 12130 + GT4
CAZyme k141_6552 k141_6552_12 12123 13241 + GT2
CAZyme k141_6552 k141_6552_13 13234 14268 + GT2
CAZyme k141_6552 k141_6552_14 14268 15290 + GT2
pfam k141_6552 k141_6552_15 15338 15877 + Hexapep | Hexapep_2
CAZyme k141_6552 k141_6552_16 15893 17017 + GT4
CAZyme k141_6552 k141_6552_17 17070 18122 + GT2
CAZyme k141_6552 k141_6552_18 18160 19143 + GT2
CAZyme k141_6552 k141_6552_19 19183 20373 + GT4
CAZyme k141_6552 k141_6552_20 20406 21383 + GT2
TC k141_6552 k141_6552_21 21414 22976 + 2.A.66.1.40
Gene ID: k141_6552_1
Type: TC
Location: 390 - 2300 (+)
Gene ID: k141_6552_2
Type: STP
Location: 2300 - 3493 (+)
Gene ID: k141_6552_3
Type: TC
Location: 3602 - 4198 (+)
Gene ID: k141_6552_4
Type: pfam
Location: 4306 - 5040 (+)
Gene ID: k141_6552_5
Type: TC
Location: 4991 - 5668 (+)
Gene ID: k141_6552_6
Type: pfam
Location: 5687 - 6376 (+)
Gene ID: k141_6552_7
Type: CAZyme
Location: 6345 - 7505 (+)
Gene ID: k141_6552_8
Type: CAZyme
Location: 7586 - 8692 (+)
Gene ID: k141_6552_9
Type:
Location: 8710 - 9957 (+)
Gene ID: k141_6552_10
Type: CAZyme
Location: 9951 - 11036 (+)
Gene ID: k141_6552_11
Type: CAZyme
Location: 11057 - 12130 (+)
Gene ID: k141_6552_12
Type: CAZyme
Location: 12123 - 13241 (+)
Gene ID: k141_6552_13
Type: CAZyme
Location: 13234 - 14268 (+)
Gene ID: k141_6552_14
Type: CAZyme
Location: 14268 - 15290 (+)
Gene ID: k141_6552_15
Type: pfam
Location: 15338 - 15877 (+)
Gene ID: k141_6552_16
Type: CAZyme
Location: 15893 - 17017 (+)
Gene ID: k141_6552_17
Type: CAZyme
Location: 17070 - 18122 (+)
Gene ID: k141_6552_18
Type: CAZyme
Location: 18160 - 19143 (+)
Gene ID: k141_6552_19
Type: CAZyme
Location: 19183 - 20373 (+)
Gene ID: k141_6552_20
Type: CAZyme
Location: 20406 - 21383 (+)
Gene ID: k141_6552_21
Type: TC
Location: 21414 - 22976 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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