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Cluster: CGMR052643_CGC14

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_5050 k141_5050_2 1665 2747 + 3.A.1.1.45
TC k141_5050 k141_5050_3 2747 3604 + 3.A.1.1.45
CAZyme k141_5050 k141_5050_4 3659 4741 + GH179
pfam k141_5050 k141_5050_5 4759 5730 + AP_endonuc_2
CAZyme k141_5050 k141_5050_6 5770 6831 + GH179
CAZyme k141_5050 k141_5050_7 6866 8536 + GH13_31
pfam k141_5050 k141_5050_8 9072 9581 + Ferritin
TC k141_5050 k141_5050_9 9754 10938 - 2.A.1.7.6
TF k141_5050 k141_5050_10 11046 11933 + HTH_AraC | HTH_AraC
TC k141_5050 k141_5050_11 12227 13561 + 3.A.1.1.4
TC k141_5050 k141_5050_12 13719 14612 + 3.A.1.1.4
TC k141_5050 k141_5050_13 14605 15414 + 3.A.1.1.4
TC k141_5050 k141_5050_14 15473 16921 + 2.A.39.3.14
Gene ID: k141_5050_2
Type: TC
Location: 1665 - 2747 (+)
Gene ID: k141_5050_3
Type: TC
Location: 2747 - 3604 (+)
Gene ID: k141_5050_4
Type: CAZyme
Location: 3659 - 4741 (+)
Gene ID: k141_5050_5
Type: pfam
Location: 4759 - 5730 (+)
Gene ID: k141_5050_6
Type: CAZyme
Location: 5770 - 6831 (+)
Gene ID: k141_5050_7
Type: CAZyme
Location: 6866 - 8536 (+)
Gene ID: k141_5050_8
Type: pfam
Location: 9072 - 9581 (+)
Gene ID: k141_5050_9
Type: TC
Location: 9754 - 10938 (-)
Gene ID: k141_5050_10
Type: TF
Location: 11046 - 11933 (+)
Gene ID: k141_5050_11
Type: TC
Location: 12227 - 13561 (+)
Gene ID: k141_5050_12
Type: TC
Location: 13719 - 14612 (+)
Gene ID: k141_5050_13
Type: TC
Location: 14605 - 15414 (+)
Gene ID: k141_5050_14
Type: TC
Location: 15473 - 16921 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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