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Cluster: CGMR052643_CGC10

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_12113 k141_12113_2 1162 2121 + 3.A.1.1.10
TC k141_12113 k141_12113_3 2141 3151 + 3.A.1.1.29
CAZyme k141_12113 k141_12113_4 3329 6463 + GH38
TF k141_12113 k141_12113_5 6495 7238 + HTH_AraC | HTH_AraC
CAZyme k141_12113 k141_12113_6 7466 12868 + GH85
STP k141_12113 k141_12113_7 13094 14539 + SBP_bac_1
CAZyme k141_12113 k141_12113_8 14742 17114 + GH3
CAZyme k141_12113 k141_12113_9 17262 20933 + CBM32 | GH85
CAZyme k141_12113 k141_12113_10 21006 22862 + GH20
Gene ID: k141_12113_2
Type: TC
Location: 1162 - 2121 (+)
Gene ID: k141_12113_3
Type: TC
Location: 2141 - 3151 (+)
Gene ID: k141_12113_4
Type: CAZyme
Location: 3329 - 6463 (+)
Gene ID: k141_12113_5
Type: TF
Location: 6495 - 7238 (+)
Gene ID: k141_12113_6
Type: CAZyme
Location: 7466 - 12868 (+)
Gene ID: k141_12113_7
Type: STP
Location: 13094 - 14539 (+)
Gene ID: k141_12113_8
Type: CAZyme
Location: 14742 - 17114 (+)
Gene ID: k141_12113_9
Type: CAZyme
Location: 17262 - 20933 (+)
Gene ID: k141_12113_10
Type: CAZyme
Location: 21006 - 22862 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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