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Cluster: CGMR052643_CGC1

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme k141_27550 k141_27550_12 8906 11659 - GH3
TC k141_27550 k141_27550_13 11909 12895 + 3.A.1.1.29
TC k141_27550 k141_27550_14 12951 13835 + 3.A.1.1.29
TC k141_27550 k141_27550_15 13912 15588 + 3.A.1.1.29
CAZyme k141_27550 k141_27550_16 15778 18111 + GH31_3
CAZyme k141_27550 k141_27550_17 18266 20401 + GH3
CAZyme k141_27550 k141_27550_18 20413 22734 + GH95
TC k141_27550 k141_27550_19 23026 24816 + 8.A.59.2.1
TF k141_27550 k141_27550_20 24810 26348 + HTH_AraC | HTH_AraC
pfam k141_27550 k141_27550_21 26399 27031 - ABC2_membrane_5
TC k141_27550 k141_27550_22 27035 27886 - 3.A.1.149.1
TF k141_27550 k141_27550_23 27889 28263 - GntR
peptidase k141_27550 k141_27550_24 28387 29247 - S66.UPW
CAZyme k141_27550 k141_27550_25 29490 30392 + CBM32 | CBM40
CAZyme k141_27550 k141_27550_26 30609 32960 + GH33
TC k141_27550 k141_27550_27 33188 33820 + 9.B.20.1.4
NULL(UNKNOWN) k141_27550 k141_27550_28 34115 34609 + NULL(UNKNOWN)
[View Structural Homologs]
pfam k141_27550 k141_27550_29 34626 35165 + DNA_binding_1 | Methyltransf_1N
TC k141_27550 k141_27550_30 35550 36356 + 2.A.5.5.2
Gene ID: k141_27550_12
Type: CAZyme
Location: 8906 - 11659 (-)
Gene ID: k141_27550_13
Type: TC
Location: 11909 - 12895 (+)
Gene ID: k141_27550_14
Type: TC
Location: 12951 - 13835 (+)
Gene ID: k141_27550_15
Type: TC
Location: 13912 - 15588 (+)
Gene ID: k141_27550_16
Type: CAZyme
Location: 15778 - 18111 (+)
Gene ID: k141_27550_17
Type: CAZyme
Location: 18266 - 20401 (+)
Gene ID: k141_27550_18
Type: CAZyme
Location: 20413 - 22734 (+)
Gene ID: k141_27550_19
Type: TC
Location: 23026 - 24816 (+)
Gene ID: k141_27550_20
Type: TF
Location: 24810 - 26348 (+)
Gene ID: k141_27550_21
Type: pfam
Location: 26399 - 27031 (-)
Gene ID: k141_27550_22
Type: TC
Location: 27035 - 27886 (-)
Gene ID: k141_27550_23
Type: TF
Location: 27889 - 28263 (-)
Gene ID: k141_27550_24
Type: peptidase
Location: 28387 - 29247 (-)
Gene ID: k141_27550_25
Type: CAZyme
Location: 29490 - 30392 (+)
Gene ID: k141_27550_26
Type: CAZyme
Location: 30609 - 32960 (+)
Gene ID: k141_27550_27
Type: TC
Location: 33188 - 33820 (+)
Gene ID: k141_27550_28
Type:
Location: 34115 - 34609 (+)
Gene ID: k141_27550_29
Type: pfam
Location: 34626 - 35165 (+)
Gene ID: k141_27550_30
Type: TC
Location: 35550 - 36356 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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