Cluster: CGMR052483_CGC6
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 2
- Substrate:
- Genome ID: CGMR052483
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | k141_27999 | k141_27999_11 | 10082 | 12265 | + | 3.A.16.1.2 |
| CAZyme | k141_27999 | k141_27999_12 | 12335 | 13774 | - | GH77 |
| peptidase | k141_27999 | k141_27999_13 | 13871 | 14806 | - | S09.UPW |
| TF | k141_27999 | k141_27999_14 | 14918 | 15904 | - | LacI |
| CAZyme | k141_27999 | k141_27999_15 | 15941 | 18199 | - | GH13_4 |
Gene ID: k141_27999_11
Type: TC
Location: 10082 - 12265 (+)
Type: TC
Location: 10082 - 12265 (+)
Gene ID: k141_27999_12
Type: CAZyme
Location: 12335 - 13774 (-)
Type: CAZyme
Location: 12335 - 13774 (-)
Gene ID: k141_27999_13
Type: peptidase
Location: 13871 - 14806 (-)
Type: peptidase
Location: 13871 - 14806 (-)
Gene ID: k141_27999_14
Type: TF
Location: 14918 - 15904 (-)
Type: TF
Location: 14918 - 15904 (-)
Gene ID: k141_27999_15
Type: CAZyme
Location: 15941 - 18199 (-)
Type: CAZyme
Location: 15941 - 18199 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Oscillospiraceae
Genus
Lawsonibacter
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| k141_27999_15 | vegan > omnivore | 1.40858 | 0.00701 |