Cluster: CGMR052483_CGC1
🧬 Cluster Details
- Gene Count: 8
- CAZyme Count: 2
- Substrate:
- Genome ID: CGMR052483
- CGC Family ID: CGCFAM_00085
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | k141_1834 | k141_1834_2 | 1187 | 2032 | - | 3.A.1.15.13 |
| TC | k141_1834 | k141_1834_3 | 2032 | 2835 | - | 3.A.1.15.5 |
| TC | k141_1834 | k141_1834_4 | 2832 | 3800 | - | 3.A.1.15.4 |
| CAZyme | k141_1834 | k141_1834_5 | 3937 | 6150 | - | GT4 |
| pfam | k141_1834 | k141_1834_6 | 6173 | 6685 | - | DUF4330 |
| pfam | k141_1834 | k141_1834_7 | 6682 | 7185 | - | DUF4330 |
| CAZyme | k141_1834 | k141_1834_8 | 7166 | 8305 | - | GT4 |
| TC | k141_1834 | k141_1834_9 | 8302 | 9750 | - | 9.B.67.1.1 |
Gene ID: k141_1834_2
Type: TC
Location: 1187 - 2032 (-)
Type: TC
Location: 1187 - 2032 (-)
Gene ID: k141_1834_3
Type: TC
Location: 2032 - 2835 (-)
Type: TC
Location: 2032 - 2835 (-)
Gene ID: k141_1834_4
Type: TC
Location: 2832 - 3800 (-)
Type: TC
Location: 2832 - 3800 (-)
Gene ID: k141_1834_5
Type: CAZyme
Location: 3937 - 6150 (-)
Type: CAZyme
Location: 3937 - 6150 (-)
Gene ID: k141_1834_6
Type: pfam
Location: 6173 - 6685 (-)
Type: pfam
Location: 6173 - 6685 (-)
Gene ID: k141_1834_7
Type: pfam
Location: 6682 - 7185 (-)
Type: pfam
Location: 6682 - 7185 (-)
Gene ID: k141_1834_8
Type: CAZyme
Location: 7166 - 8305 (-)
Type: CAZyme
Location: 7166 - 8305 (-)
Gene ID: k141_1834_9
Type: TC
Location: 8302 - 9750 (-)
Type: TC
Location: 8302 - 9750 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Oscillospiraceae
Genus
Lawsonibacter
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.