Cluster: CGMR051947_CGC5
🧬 Cluster Details
- Gene Count: 8
- CAZyme Count: 1
- Substrate:
- Genome ID: CGMR051947
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | k141_66418 | k141_66418_4 | 5630 | 8263 | + | 3.A.3.2.22 |
| TC | k141_66418 | k141_66418_5 | 8311 | 9651 | + | 9.A.40.2.2 |
| pfam | k141_66418 | k141_66418_6 | 9710 | 10669 | - | Ldh_1_N | Ldh_1_C |
| peptidase | k141_66418 | k141_66418_7 | 10841 | 12577 | - | M38.UNW |
| TC | k141_66418 | k141_66418_8 | 12618 | 14231 | - | 2.A.1.3.7 |
| TF | k141_66418 | k141_66418_9 | 14370 | 15251 | + | HTH_1 |
| CAZyme | k141_66418 | k141_66418_10 | 15792 | 17099 | + | GT112 |
| TC | k141_66418 | k141_66418_11 | 17178 | 19364 | + | 1.B.12.2.4 |
Gene ID: k141_66418_4
Type: TC
Location: 5630 - 8263 (+)
Type: TC
Location: 5630 - 8263 (+)
Gene ID: k141_66418_5
Type: TC
Location: 8311 - 9651 (+)
Type: TC
Location: 8311 - 9651 (+)
Gene ID: k141_66418_6
Type: pfam
Location: 9710 - 10669 (-)
Type: pfam
Location: 9710 - 10669 (-)
Gene ID: k141_66418_7
Type: peptidase
Location: 10841 - 12577 (-)
Type: peptidase
Location: 10841 - 12577 (-)
Gene ID: k141_66418_8
Type: TC
Location: 12618 - 14231 (-)
Type: TC
Location: 12618 - 14231 (-)
Gene ID: k141_66418_9
Type: TF
Location: 14370 - 15251 (+)
Type: TF
Location: 14370 - 15251 (+)
Gene ID: k141_66418_10
Type: CAZyme
Location: 15792 - 17099 (+)
Type: CAZyme
Location: 15792 - 17099 (+)
Gene ID: k141_66418_11
Type: TC
Location: 17178 - 19364 (+)
Type: TC
Location: 17178 - 19364 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_C
Class
Negativicutes
Order
Acidaminococcales
Family
Acidaminococcaceae
Genus
Phascolarctobacterium
Species
Phascolarctobacterium faecium
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.