dbCAN Logo

Cluster: CGMR051453_CGC2

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_180329 k141_180329_11 11542 12831 + 3.A.1.1.28
TC k141_180329 k141_180329_12 12889 13809 + 3.A.1.1.42
TC k141_180329 k141_180329_13 13829 14722 + 3.A.1.1.6
NULL(UNKNOWN) k141_180329 k141_180329_14 14754 19661 + NULL(UNKNOWN)
[View Structural Homologs]
pfam k141_180329 k141_180329_15 19685 23050 + GxGYxYP_C | GxGYxYP_N | GxGYxYP_N_3rd
CAZyme k141_180329 k141_180329_16 23089 24435 + GH29
CAZyme k141_180329 k141_180329_17 24491 26497 + GH151
Gene ID: k141_180329_11
Type: TC
Location: 11542 - 12831 (+)
Gene ID: k141_180329_12
Type: TC
Location: 12889 - 13809 (+)
Gene ID: k141_180329_13
Type: TC
Location: 13829 - 14722 (+)
Gene ID: k141_180329_14
Type:
Location: 14754 - 19661 (+)
Gene ID: k141_180329_15
Type: pfam
Location: 19685 - 23050 (+)
Gene ID: k141_180329_16
Type: CAZyme
Location: 23089 - 24435 (+)
Gene ID: k141_180329_17
Type: CAZyme
Location: 24491 - 26497 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

← Back to Cluster List