Cluster: CGMR051444_CGC8
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 2
- Substrate:
- Genome ID: CGMR051444
- CGC Family ID: CGCFAM_07738
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | k141_340001 | k141_340001_2 | 348 | 1307 | - | 9.B.10.1.1 |
| NULL(UNKNOWN) | k141_340001 | k141_340001_3 | 1300 | 1638 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | k141_340001 | k141_340001_4 | 1687 | 2568 | - | CE4 |
| pfam | k141_340001 | k141_340001_5 | 2579 | 3433 | - | CN_hydrolase |
| STP | k141_340001 | k141_340001_6 | 3926 | 5266 | + | AAA |
| CAZyme | k141_340001 | k141_340001_7 | 5349 | 6458 | + | GT107 |
| TC | k141_340001 | k141_340001_8 | 6495 | 7691 | + | 9.A.41.1.3 |
Gene ID: k141_340001_2
Type: TC
Location: 348 - 1307 (-)
Type: TC
Location: 348 - 1307 (-)
Gene ID: k141_340001_3
Type:
Location: 1300 - 1638 (-)
Type:
Location: 1300 - 1638 (-)
Gene ID: k141_340001_4
Type: CAZyme
Location: 1687 - 2568 (-)
Type: CAZyme
Location: 1687 - 2568 (-)
Gene ID: k141_340001_5
Type: pfam
Location: 2579 - 3433 (-)
Type: pfam
Location: 2579 - 3433 (-)
Gene ID: k141_340001_6
Type: STP
Location: 3926 - 5266 (+)
Type: STP
Location: 3926 - 5266 (+)
Gene ID: k141_340001_7
Type: CAZyme
Location: 5349 - 6458 (+)
Type: CAZyme
Location: 5349 - 6458 (+)
Gene ID: k141_340001_8
Type: TC
Location: 6495 - 7691 (+)
Type: TC
Location: 6495 - 7691 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Campylobacterota
Class
Campylobacteria
Order
Campylobacterales
Family
Campylobacteraceae
Genus
Campylobacter_D
Species
Campylobacter_D cuniculorum
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.