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Cluster: CGMR051215_CGC68

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_48480 k141_48480_11 9916 11481 - 3.A.1.12.8
TC k141_48480 k141_48480_12 11481 12614 - 3.A.1.12.3
TF k141_48480 k141_48480_13 12734 13372 - GntR
pfam k141_48480 k141_48480_14 13588 15498 - Prismane
TC k141_48480 k141_48480_15 15667 16197 - 4.A.1.2.6
CAZyme k141_48480 k141_48480_16 16219 18021 - GH2
TC k141_48480 k141_48480_17 18038 19420 - 4.A.1.2.5
pfam k141_48480 k141_48480_18 19522 20361 - PRD | PRD | CAT_RBD
CAZyme k141_48480 k141_48480_19 20570 21982 - GH1
Gene ID: k141_48480_11
Type: TC
Location: 9916 - 11481 (-)
Gene ID: k141_48480_12
Type: TC
Location: 11481 - 12614 (-)
Gene ID: k141_48480_13
Type: TF
Location: 12734 - 13372 (-)
Gene ID: k141_48480_14
Type: pfam
Location: 13588 - 15498 (-)
Gene ID: k141_48480_15
Type: TC
Location: 15667 - 16197 (-)
Gene ID: k141_48480_16
Type: CAZyme
Location: 16219 - 18021 (-)
Gene ID: k141_48480_17
Type: TC
Location: 18038 - 19420 (-)
Gene ID: k141_48480_18
Type: pfam
Location: 19522 - 20361 (-)
Gene ID: k141_48480_19
Type: CAZyme
Location: 20570 - 21982 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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