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Cluster: CGMR051215_CGC6

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme k141_79351 k141_79351_37 46447 49488 + GH2
TF k141_79351 k141_79351_38 49478 51664 + HTH_AraC
TC k141_79351 k141_79351_39 51865 52833 + 3.A.1.1.10
TC k141_79351 k141_79351_40 52849 53751 + 3.A.1.1.29
NULL(UNKNOWN) k141_79351 k141_79351_41 53777 55366 + NULL(UNKNOWN)
[View Structural Homologs]
CAZyme k141_79351 k141_79351_42 55482 58118 + PL26
CAZyme k141_79351 k141_79351_43 58134 61277 + CE12 | PL11
CAZyme k141_79351 k141_79351_44 61281 62330 + GH105
pfam k141_79351 k141_79351_45 62327 63136 + Polysacc_deac_1
TC k141_79351 k141_79351_46 63138 63701 - 2.A.107.1.1
Gene ID: k141_79351_37
Type: CAZyme
Location: 46447 - 49488 (+)
Gene ID: k141_79351_38
Type: TF
Location: 49478 - 51664 (+)
Gene ID: k141_79351_39
Type: TC
Location: 51865 - 52833 (+)
Gene ID: k141_79351_40
Type: TC
Location: 52849 - 53751 (+)
Gene ID: k141_79351_41
Type:
Location: 53777 - 55366 (+)
Gene ID: k141_79351_42
Type: CAZyme
Location: 55482 - 58118 (+)
Gene ID: k141_79351_43
Type: CAZyme
Location: 58134 - 61277 (+)
Gene ID: k141_79351_44
Type: CAZyme
Location: 61281 - 62330 (+)
Gene ID: k141_79351_45
Type: pfam
Location: 62327 - 63136 (+)
Gene ID: k141_79351_46
Type: TC
Location: 63138 - 63701 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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