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Cluster: CGMR051215_CGC59

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme k141_81465 k141_81465_235 259724 261244 + CBM91 | GH43_10
CAZyme k141_81465 k141_81465_236 261279 263477 + GH36
CAZyme k141_81465 k141_81465_237 263496 265040 + CBM91 | GH43_10
TC k141_81465 k141_81465_238 265037 267343 + 3.A.1.135.5
pfam k141_81465 k141_81465_239 267351 267893 + DUF1854
TC k141_81465 k141_81465_240 267905 270088 + 3.A.1.135.5
TF k141_81465 k141_81465_241 270103 271026 - HTH_AraC | HTH_AraC
STP k141_81465 k141_81465_242 271264 274182 + SBP_bac_1
TC k141_81465 k141_81465_243 274195 275133 + 3.A.1.1.11
TC k141_81465 k141_81465_244 275135 276007 + 3.A.1.1.36
Gene ID: k141_81465_235
Type: CAZyme
Location: 259724 - 261244 (+)
Gene ID: k141_81465_236
Type: CAZyme
Location: 261279 - 263477 (+)
Gene ID: k141_81465_237
Type: CAZyme
Location: 263496 - 265040 (+)
Gene ID: k141_81465_238
Type: TC
Location: 265037 - 267343 (+)
Gene ID: k141_81465_239
Type: pfam
Location: 267351 - 267893 (+)
Gene ID: k141_81465_240
Type: TC
Location: 267905 - 270088 (+)
Gene ID: k141_81465_241
Type: TF
Location: 270103 - 271026 (-)
Gene ID: k141_81465_242
Type: STP
Location: 271264 - 274182 (+)
Gene ID: k141_81465_243
Type: TC
Location: 274195 - 275133 (+)
Gene ID: k141_81465_244
Type: TC
Location: 275135 - 276007 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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