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Cluster: CGMR051215_CGC54

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_53802 k141_53802_65 63164 65032 + 4.A.1.2.11
CAZyme k141_53802 k141_53802_66 65051 66490 + GH1
peptidase k141_53802 k141_53802_67 66513 68261 + S09.UPW
TF k141_53802 k141_53802_68 68379 70007 + HTH_AraC | HTH_AraC
TC k141_53802 k141_53802_69 69991 71424 + 8.A.59.2.1
TC k141_53802 k141_53802_70 71599 72684 + 3.A.1.2.14
TC k141_53802 k141_53802_71 72840 74360 + 3.A.1.2.23
TC k141_53802 k141_53802_72 74353 75408 + 3.A.1.2.25
TC k141_53802 k141_53802_73 75409 76425 + 3.A.1.2.14
TF k141_53802 k141_53802_74 76496 77242 - HTH_AraC | HTH_AraC
TC k141_53802 k141_53802_75 77239 79080 - 9.B.33.1.1
STP k141_53802 k141_53802_76 79229 80587 + SBP_bac_1
TC k141_53802 k141_53802_77 80622 81500 + 3.A.1.1.7
TC k141_53802 k141_53802_78 81500 82327 + 3.A.1.1.41
CAZyme k141_53802 k141_53802_79 82332 84758 + GH31_4
TC k141_53802 k141_53802_80 84954 86339 + 2.A.66.1.28
TF k141_53802 k141_53802_81 86266 87147 - HTH_AraC | HTH_AraC
CAZyme k141_53802 k141_53802_82 87455 89956 - GH31_2
CAZyme k141_53802 k141_53802_83 90218 91018 + CE1
TC k141_53802 k141_53802_84 91365 93566 + 3.A.7.7.1
TF k141_53802 k141_53802_85 93729 94703 + LacI
pfam k141_53802 k141_53802_86 94751 95854 + Phosphonate-bd
TC k141_53802 k141_53802_87 95938 96693 + 3.A.1.9.2
pfam k141_53802 k141_53802_88 96690 97511 + BPD_transp_1
TC k141_53802 k141_53802_89 97524 98333 + 3.A.1.9.1
sulfatase k141_53802 k141_53802_90 98338 99858 + S1_23
TC k141_53802 k141_53802_91 100070 101305 + 1.A.11.5.1
Gene ID: k141_53802_65
Type: TC
Location: 63164 - 65032 (+)
Gene ID: k141_53802_66
Type: CAZyme
Location: 65051 - 66490 (+)
Gene ID: k141_53802_67
Type: peptidase
Location: 66513 - 68261 (+)
Gene ID: k141_53802_68
Type: TF
Location: 68379 - 70007 (+)
Gene ID: k141_53802_69
Type: TC
Location: 69991 - 71424 (+)
Gene ID: k141_53802_70
Type: TC
Location: 71599 - 72684 (+)
Gene ID: k141_53802_71
Type: TC
Location: 72840 - 74360 (+)
Gene ID: k141_53802_72
Type: TC
Location: 74353 - 75408 (+)
Gene ID: k141_53802_73
Type: TC
Location: 75409 - 76425 (+)
Gene ID: k141_53802_74
Type: TF
Location: 76496 - 77242 (-)
Gene ID: k141_53802_75
Type: TC
Location: 77239 - 79080 (-)
Gene ID: k141_53802_76
Type: STP
Location: 79229 - 80587 (+)
Gene ID: k141_53802_77
Type: TC
Location: 80622 - 81500 (+)
Gene ID: k141_53802_78
Type: TC
Location: 81500 - 82327 (+)
Gene ID: k141_53802_79
Type: CAZyme
Location: 82332 - 84758 (+)
Gene ID: k141_53802_80
Type: TC
Location: 84954 - 86339 (+)
Gene ID: k141_53802_81
Type: TF
Location: 86266 - 87147 (-)
Gene ID: k141_53802_82
Type: CAZyme
Location: 87455 - 89956 (-)
Gene ID: k141_53802_83
Type: CAZyme
Location: 90218 - 91018 (+)
Gene ID: k141_53802_84
Type: TC
Location: 91365 - 93566 (+)
Gene ID: k141_53802_85
Type: TF
Location: 93729 - 94703 (+)
Gene ID: k141_53802_86
Type: pfam
Location: 94751 - 95854 (+)
Gene ID: k141_53802_87
Type: TC
Location: 95938 - 96693 (+)
Gene ID: k141_53802_88
Type: pfam
Location: 96690 - 97511 (+)
Gene ID: k141_53802_89
Type: TC
Location: 97524 - 98333 (+)
Gene ID: k141_53802_90
Type: sulfatase
Location: 98338 - 99858 (+)
Gene ID: k141_53802_91
Type: TC
Location: 100070 - 101305 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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